Gorai.006G025100 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.006G025100 T008556_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G025100.1 AP2 64 121
Gorai.006G025100.1 AP2 163 215

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

286 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mg013664m Mimulus guttatus mg013664m N 0.912
mgf019814m Mimulus guttatus mgf019814m N 0.910
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.909
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.895
Ca_20689 Cicer arietinum Ca_20689 N 0.893
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.889
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.884
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.884
29822.m003477 Ricinus communis 29822.m003477 N 0.884
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.882
Ca_10533 Cicer arietinum Ca_10533 N 0.878
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.875
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.875
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.869
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.868
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.863
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.862
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.860
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.859
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.857
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.857
Ca_17532 Cicer arietinum Ca_17532 N 0.857
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.857
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.856
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.854
Pm015847 Prunus mume Pm015847 N 0.854
30069.m000440 Ricinus communis 30069.m000440 N 0.854
Bra003178 Brassica rapa Bra003178 N 0.853
Bra007066 Brassica rapa Bra007066 N 0.853
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.853
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.853
Pm017032 Prunus mume Pm017032 N 0.852
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.851
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.850
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.850
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.849
Si012026m.g Setaria italica Si012026m.g N 0.849
Si026433m.g Setaria italica Si026433m.g N 0.849
Pm006561 Prunus mume Pm006561 N 0.849
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.847
Pm015843 Prunus mume Pm015843 N 0.846
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.845
TCM_018386 Theobroma cacao TCM_018386 N 0.843
Cla020765 Citrullus lanatus Cla020765 N 0.843
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.843
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.842
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.842
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.842
TCM_011797 Theobroma cacao TCM_011797 N 0.841
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.840
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.840
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.840
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.840
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.840
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.838
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.836
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.836
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.836
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.835
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.834
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.834
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.832
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.832
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.831
OBART09G10730 Oryza barthii OBART09G10730 N 0.831
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.831
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.831
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.831
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.831
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.831
Cla019044 Citrullus lanatus Cla019044 N 0.831
Pm013856 Prunus mume Pm013856 N 0.831
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.830
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.829
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.829
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.829
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.829
MDP0000231748 Malus domestica MDP0000231748 N 0.829
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.827
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.827
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.827
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.827
Si007857m.g Setaria italica Si007857m.g N 0.827
TCM_038442 Theobroma cacao TCM_038442 N 0.827
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.827
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.827
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.827
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.827
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.827
MDP0000133423 Malus domestica MDP0000133423 N 0.827
MDP0000318457 Malus domestica MDP0000318457 N 0.827
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.827
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.826
Cla015555 Citrullus lanatus Cla015555 N 0.826
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.825
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.825
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.824
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.824
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.824
OBART06G03040 Oryza barthii OBART06G03040 N 0.824
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.824
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.824
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.824
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.824
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.824
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.824
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.823
Bo6g124080 Brassica oleracea Bo6g124080 N 0.823
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.823
OB09G17420 Oryza brachyantha OB09G17420 I 0.823
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.823
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.823
OS09G0423800 Oryza sativa OS09G0423800 I 0.823
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.823
Si030129m.g Setaria italica Si030129m.g I 0.823
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.823
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.822
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.820
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.820
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.819
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.819
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.819
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.819
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.818
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.818
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.818
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.818
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.818
MDP0000281784 Malus domestica MDP0000281784 I 0.818
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.818
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.818
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.817
TCM_027569 Theobroma cacao TCM_027569 I 0.817
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.817
Pm008629 Prunus mume Pm008629 I 0.817
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.817
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.817
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.817
MDP0000186581 Malus domestica MDP0000186581 N 0.817
MDP0000297698 Malus domestica MDP0000297698 N 0.817
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.817
WRI1 Arabidopsis thaliana AT3G54320 I 0.816
Bo6g067950 Brassica oleracea Bo6g067950 I 0.816
Bo8g083590 Brassica oleracea Bo8g083590 I 0.816
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.816
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.816
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.816
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.816
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.816
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.816
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.816
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.816
Bra035137 Brassica rapa Bra035137 I 0.815
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.815
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.815
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.815
PK24809.1 Cannabis sativa PK24809.1 I 0.815
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.814
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.813
TCM_044588 Theobroma cacao TCM_044588 I 0.813
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.813
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.813
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.813
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.812
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.812
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.812
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.812
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.812
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.812
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.812
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.812
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.812
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.812
PK26651.1 Cannabis sativa PK26651.1 I 0.811
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.810
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.809
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.809
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.809
30114.m000507 Ricinus communis 30114.m000507 N 0.809
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.807
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.807
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.807
PK04008.1 Cannabis sativa PK04008.1 I 0.807
Bo5g021520 Brassica oleracea Bo5g021520 N 0.806
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.806
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.805
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.805
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.805
MDP0000206674 Malus domestica MDP0000206674 N 0.805
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.804
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.804
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.804
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.803
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.803
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.803
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.803
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.803
Si022186m.g Setaria italica Si022186m.g I 0.803
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.803
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.803
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.803
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.803
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.803
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.802
F775_02400 Aegilops tauschii F775_02400 I 0.802
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.802
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.800
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.800
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.799
OS06G0145700 Oryza sativa OS06G0145700 N 0.799
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.799
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.799
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.799
OBART12G01740 Oryza barthii OBART12G01740 N 0.798
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.798
mgf017413m Mimulus guttatus mgf017413m N 0.798
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.798
OB05G31600 Oryza brachyantha OB05G31600 I 0.797
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.796
F775_06373 Aegilops tauschii F775_06373 N 0.796
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.796
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.796
OS08G0442400 Oryza sativa OS08G0442400 I 0.796
Bra026082 Brassica rapa Bra026082 I 0.795
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.795
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.795
ADAP Arabidopsis thaliana AT1G16060 I 0.793
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.793
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.793
Ca_03306 Cicer arietinum Ca_03306 N 0.792
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.792
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.791
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.787
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.782
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.782
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.781
mgf019116m Mimulus guttatus mgf019116m N 0.780
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.780
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.779
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.777
F775_02064 Aegilops tauschii F775_02064 N 0.776
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.776
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.775
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.775
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.775
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.774
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.773
OB11G11380 Oryza brachyantha OB11G11380 I 0.772
OB12G11690 Oryza brachyantha OB12G11690 I 0.772
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.772
OS12G0126300 Oryza sativa OS12G0126300 I 0.772
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.771
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.770
Si013842m.g Setaria italica Si013842m.g N 0.770
Cla017294 Citrullus lanatus Cla017294 N 0.769
mgf008907m Mimulus guttatus mgf008907m I 0.769
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.766
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.766
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.765
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.764
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.763
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.763
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.763
OS05G0536250 Oryza sativa OS05G0536250 I 0.763
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.755
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.752
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.751
MDP0000166059 Malus domestica MDP0000166059 N 0.751
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.731
OB08G23780 Oryza brachyantha OB08G23780 N 0.723
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.716
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.713
OB01G43640 Oryza brachyantha OB01G43640 N 0.712
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.712
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.712
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.708
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.707
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.702
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.695
Gorai.006G025200 Gossypium raimondii Gorai.006G025200 N 0.691
BGIOSGA004677 Oryza indica BGIOSGA004677 N 0.681
OBART01G34800 Oryza barthii OBART01G34800 N 0.681
OGLUM01G38820 Oryza glumaepatula OGLUM01G38820 N 0.681
ONIVA01G39780 Oryza nivara ONIVA01G39780 N 0.681
ORGLA01G0286200 Oryza glaberrima ORGLA01G0286200 N 0.681
ORUFI01G38130 Oryza rufipogon ORUFI01G38130 N 0.681