Pavir.Fa00925 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Fa00925 T009440_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fa00925.1.p AP2 96 153
Pavir.Fa00925.1.p AP2 195 231

Links

Other AP2 family TFs
Other Panicum virgatum TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si013842m.g Setaria italica Si013842m.g N 0.802
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.792
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.787
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.717
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.714
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.713
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.712
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.712
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.712
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.712
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.712
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.712
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.712
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.712
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.712
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.712
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.712
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.711
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.707
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.703
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.698
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.698
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.696
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.688
OBART12G01740 Oryza barthii OBART12G01740 N 0.686
Si012026m.g Setaria italica Si012026m.g N 0.686
Si026433m.g Setaria italica Si026433m.g N 0.686
mgf019116m Mimulus guttatus mgf019116m N 0.683
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.681
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.681
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.680
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.680
Pm006561 Prunus mume Pm006561 N 0.680
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.679
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.679
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.678
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.677
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.677
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.677