OGLUM09G04690 (Oryza glumaepatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OGLUM09G04690 T003307_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.734 0.771
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.734 0.771
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.730 0.750
0100010458
M01644_2.00 		Ostreococcus tauri
MGCCGSCR
YGSCGGCK		 PBM
Weirauch et al.(2014)
pTH9447 		0.712 0.708
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.706 0.750
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.698 0.729
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.697 0.708
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.697 0.708
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.697 0.708
O65242_TOBAC
M09730_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TSI1_01 		0.696 0.688
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.690 0.688
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.689 0.667
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.678 0.646
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.677 0.729
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.677 0.729
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.677 0.729
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM09G04690.1 AP2 101 151

Links

Other AP2 family TFs
Other Oryza glumaepatula TFs

514 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0001_3341 Arabidopsis lyrata Al_scaffold_0001_3341 N
AT1G32700 Arabidopsis thaliana AT1G32700 N
Bostr.3359s0088 Boechera stricta Bostr.3359s0088 N
BRADI3G34160 Brachypodium distachyon BRADI3G34160 N
BRADI3G52170 Brachypodium distachyon BRADI3G52170 N
Bo5g049240 Brassica oleracea Bo5g049240 N
Bra023280 Brassica rapa Bra023280 N
PK20928.1 Cannabis sativa PK20928.1 N
Cagra.4962s0001 Capsella grandiflora Cagra.4962s0001 N
Carubv10009979m.g Capsella rubella Carubv10009979m.g N
evm.TU.supercontig_43.104 Carica papaya evm.TU.supercontig_43.104 N
Ca_11505 Cicer arietinum Ca_11505 N
Cla008966 Citrullus lanatus Cla008966 N
Cla016461 Citrullus lanatus Cla016461 N
Ciclev10012712m.g Citrus clementina Ciclev10012712m.g N
Ciclev10032089m.g Citrus clementina Ciclev10032089m.g N
orange1.1g026096m.g Citrus sinensis orange1.1g026096m.g N
orange1.1g027730m.g Citrus sinensis orange1.1g027730m.g N
Cucsa.313040 Cucumis sativus Cucsa.313040 N
Cucsa.321900 Cucumis sativus Cucsa.321900 N
Eucgr.A01594 Eucalyptus grandis Eucgr.A01594 N
Eucgr.D02206 Eucalyptus grandis Eucgr.D02206 N
Eucgr.E00276 Eucalyptus grandis Eucgr.E00276 N
Thhalv10008750m.g Eutrema salsugineum Thhalv10008750m.g N
GLYMA01G02180 Glycine max GLYMA01G02180 N
GLYMA01G11390 Glycine max GLYMA01G11390 N
GLYMA09G33770 Glycine max GLYMA09G33770 N
GLYMA11G01100 Glycine max GLYMA11G01100 N
Gorai.003G183000 Gossypium raimondii Gorai.003G183000 N
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N
Gorai.006G217100 Gossypium raimondii Gorai.006G217100 N
Gorai.008G226100 Gossypium raimondii Gorai.008G226100 N
MLOC_63157 Hordeum vulgare MLOC_63157 N
MLOC_69202 Hordeum vulgare MLOC_69202 N
LPERR02G23300 Leersia perrieri LPERR02G23300 N
LPERR04G19240 Leersia perrieri LPERR04G19240 N
LPERR10G15280 Leersia perrieri LPERR10G15280 N
Lus10004577.g Linum usitatissimum Lus10004577.g N
Lus10027735.g Linum usitatissimum Lus10027735.g N
Lus10030968.g Linum usitatissimum Lus10030968.g N
Lus10035554.g Linum usitatissimum Lus10035554.g N
Lus10040082.g Linum usitatissimum Lus10040082.g N
cassava2216.valid.m1 Manihot esculenta cassava2216.valid.m1 N
cassava37607.valid.m1 Manihot esculenta cassava37607.valid.m1 N
MTR_5g030130 Medicago truncatula MTR_5g030130 N
mgf023930m Mimulus guttatus mgf023930m N
GSMUA_Achr11G17810_001 Musa acuminata GSMUA_Achr11G17810_001 N
GSMUA_Achr4G27280_001 Musa acuminata GSMUA_Achr4G27280_001 N
GSMUA_Achr5G03420_001 Musa acuminata GSMUA_Achr5G03420_001 N
GSMUA_Achr5G18120_001 Musa acuminata GSMUA_Achr5G18120_001 N
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N
OBART02G28660 Oryza barthii OBART02G28660 N
OBART04G23520 Oryza barthii OBART04G23520 N
OB02G35810 Oryza brachyantha OB02G35810 N
OB04G30420 Oryza brachyantha OB04G30420 N
OB10G26540 Oryza brachyantha OB10G26540 N
ORGLA02G0246600 Oryza glaberrima ORGLA02G0246600 N
ORGLA04G0200500 Oryza glaberrima ORGLA04G0200500 N
ORGLA10G0145900 Oryza glaberrima ORGLA10G0145900 N
OGLUM02G29250 Oryza glumaepatula OGLUM02G29250 N
OGLUM04G23440 Oryza glumaepatula OGLUM04G23440 N
OGLUM10G19490 Oryza glumaepatula OGLUM10G19490 N
BGIOSGA005806 Oryza indica BGIOSGA005806 N
BGIOSGA014451 Oryza indica BGIOSGA014451 N
BGIOSGA031347 Oryza indica BGIOSGA031347 N
OLONG_011823 Oryza longistaminata OLONG_011823 N
OLONG_023395 Oryza longistaminata OLONG_023395 N
ONIVA02G31400 Oryza nivara ONIVA02G31400 N
ONIVA04G22750 Oryza nivara ONIVA04G22750 N
ONIVA10G22010 Oryza nivara ONIVA10G22010 N
OPUNC02G26310 Oryza punctata OPUNC02G26310 N
OPUNC04G21040 Oryza punctata OPUNC04G21040 N
OPUNC10G17840 Oryza punctata OPUNC10G17840 N
ORUFI02G30220 Oryza rufipogon ORUFI02G30220 N
ORUFI04G25190 Oryza rufipogon ORUFI04G25190 N
ORUFI10G20640 Oryza rufipogon ORUFI10G20640 N
OS02G0692700 Oryza sativa OS02G0692700 N
OS04G0591100 Oryza sativa OS04G0591100 N
OS10G0574700 Oryza sativa OS10G0574700 N
Pavir.Aa01152 Panicum virgatum Pavir.Aa01152 N
Pavir.Ab01769 Panicum virgatum Pavir.Ab01769 N
Pavir.Ga00766 Panicum virgatum Pavir.Ga00766 N
Pavir.Gb00818 Panicum virgatum Pavir.Gb00818 N
Pavir.J05501 Panicum virgatum Pavir.J05501 N
POPTR_0001s02390 Populus trichocarpa POPTR_0001s02390 N
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N
POPTR_0003s09160 Populus trichocarpa POPTR_0003s09160 N
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N
Pm023220 Prunus mume Pm023220 N
PRUPE_ppa011266mg Prunus persica PRUPE_ppa011266mg N
30054.m000824 Ricinus communis 30054.m000824 N
SapurV1A.0151s0140 Salix purpurea SapurV1A.0151s0140 N
SapurV1A.0226s0270 Salix purpurea SapurV1A.0226s0270 N
SapurV1A.0555s0010 Salix purpurea SapurV1A.0555s0010 N
SapurV1A.1507s0030 Salix purpurea SapurV1A.1507s0030 N
SapurV1A.5427s0010 Salix purpurea SapurV1A.5427s0010 N
Si010911m.g Setaria italica Si010911m.g N
Si035718m.g Setaria italica Si035718m.g N
Sb01g028260 Sorghum bicolor Sb01g028260 N
Sb04g031230 Sorghum bicolor Sb04g031230 N
Sb06g027000 Sorghum bicolor Sb06g027000 N
Traes_1AL_791D3B325 Triticum aestivum Traes_1AL_791D3B325 N
Traes_1BL_C202F3DE1 Triticum aestivum Traes_1BL_C202F3DE1 N
Traes_6DL_CF3557CFC Triticum aestivum Traes_6DL_CF3557CFC N
TRIUR3_30366 Triticum urartu TRIUR3_30366 N
VIT_02s0012g01400 Vitis vinifera VIT_02s0012g01400 N
GRMZM2G004548 Zea mays GRMZM2G004548 N
GRMZM2G086403 Zea mays GRMZM2G086403 N
GRMZM2G091044 Zea mays GRMZM2G091044 N
GRMZM2G093270 Zea mays GRMZM2G093270 N
GRMZM2G094168 Zea mays GRMZM2G094168 N
GRMZM2G131280 Zea mays GRMZM2G131280 N