OMERI04G18770 (Oryza meridionalis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OMERI04G18770 T003447_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.854 1.000
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.808 0.940
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.808 0.940
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.705 0.780
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.705 0.780
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.705 0.780
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.701 0.800
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.701 0.800
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.701 0.800
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.701 0.800
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.700 0.800
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.700 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI04G18770.1 AP2 51 102

Links

Other AP2 family TFs
Other Oryza meridionalis TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF584 Canis familiaris ENSCAFG00000002361 I
ENSCSAG00000001597 Chlorocebus sabaeus ENSCSAG00000001597 I
ZNF584 Equus caballus ENSECAG00000016355 I
ZNF584 Felis catus ENSFCAG00000031378 I
ZNF584 Homo sapiens ENSG00000171574 D
ENSMMUP00000011441 Macaca fascicularis ENSMMUP00000011441 I
ZNF584 Macaca mulatta ENSMMUG00000008730 I
ENSMPUG00000008302 Mustela putorius furo ENSMPUG00000008302 I
ENSNLEG00000011144 Nomascus leucogenys ENSNLEG00000011144 I
ZNF584 Otolemur garnettii ENSOGAG00000028454 I
ZNF584 Pan troglodytes ENSPTRG00000011592 I
ENSPANG00000020839 Papio anubis ENSPANG00000020839 I
ENSPPYG00000010503 Pongo abelii ENSPPYG00000010503 I
ZNF584 Procavia capensis ENSPCAG00000018877 N
ZNF584 Sus scrofa ENSSSCG00000004004 I
ZNF584 Vicugna pacos ENSVPAG00000015475 I