ORGLA04G0165700 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA04G0165700 T003885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.824 0.920
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.824 0.920
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.808 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA04G0165700.1 AP2 214 265

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BZIP44 Arabidopsis thaliana AT1G75390 D 0.000
BRADI3G22040 Brachypodium distachyon BRADI3G22040 N 0.000
BRADI4G27720 Brachypodium distachyon BRADI4G27720 N 0.000
Bra008192 Brassica rapa Bra008192 I 0.000
MLOC_71104 Hordeum vulgare MLOC_71104 N 0.000
LPERR09G03320 Leersia perrieri LPERR09G03320 N 0.000
LPERR08G10100 Leersia perrieri LPERR08G10100 N 0.000
OBART08G12060 Oryza barthii OBART08G12060 N 0.000
OBART09G04710 Oryza barthii OBART09G04710 N 0.000
OB08G20490 Oryza brachyantha OB08G20490 N 0.000
OB09G13080 Oryza brachyantha OB09G13080 N 0.000
ORGLA08G0106400 Oryza glaberrima ORGLA08G0106400 N 0.000
ORGLA03G0189000 Oryza glaberrima ORGLA03G0189000 N 0.000
OGLUM08G12880 Oryza glumaepatula OGLUM08G12880 N 0.000
OGLUM09G05500 Oryza glumaepatula OGLUM09G05500 N 0.000
BGIOSGA040512 Oryza indica BGIOSGA040512 N 0.000
BGIOSGA028522 Oryza indica BGIOSGA028522 N 0.000
OLONG_022621 Oryza longistaminata OLONG_022621 N 0.000
OLONG_017657 Oryza longistaminata OLONG_017657 N 0.000
OMERI08G10040 Oryza meridionalis OMERI08G10040 N 0.000
OMERI09G03860 Oryza meridionalis OMERI09G03860 N 0.000
ONIVA08G08480 Oryza nivara ONIVA08G08480 N 0.000
ONIVA08G12360 Oryza nivara ONIVA08G12360 N 0.000
OPUNC08G10970 Oryza punctata OPUNC08G10970 N 0.000
OPUNC09G04190 Oryza punctata OPUNC09G04190 N 0.000
ORUFI08G13590 Oryza rufipogon ORUFI08G13590 N 0.000
ORUFI09G05300 Oryza rufipogon ORUFI09G05300 N 0.000
OS09G0306400 Oryza sativa OS09G0306400 N 0.000
Pavir.Ba02250 Panicum virgatum Pavir.Ba02250 N 0.000
Pavir.Bb01636 Panicum virgatum Pavir.Bb01636 N 0.000
Si031353m.g Setaria italica Si031353m.g N 0.000
Sb02g020760 Sorghum bicolor Sb02g020760 N 0.000
Traes_5AL_D9A4DFF71 Triticum aestivum Traes_5AL_D9A4DFF71 N 0.000
Traes_5DL_67A38E9B7 Triticum aestivum Traes_5DL_67A38E9B7 N 0.000
TRIUR3_05083 Triticum urartu TRIUR3_05083 N 0.000
AC203957.3_FG004 Zea mays AC203957.3_FG004 N 0.000
GRMZM2G092137 Zea mays GRMZM2G092137 N 0.000