Bra008192 (Brassica rapa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 Bra008192 T057421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP44
M06756_2.00 		Arabidopsis thaliana
DWGMTGACGTGGC
GCCACGTCAKCWH		 Dap-seq
OMalley et al.(2016)
bZIP44_colamp_a 		0.799 0.781
BZIP44
M06757_2.00 		Arabidopsis thaliana
DDWGMTGACGTGGCM
KGCCACGTCAKCWHH		 Dap-seq
OMalley et al.(2016)
bZIP44_col 		0.799 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008192.1-P bZIP 24 87

Links

Other bZIP family TFs
Other Brassica rapa TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g086380 Brassica oleracea Bo6g086380 I 0.872
BZIP44 Arabidopsis thaliana AT1G75390 D 0.861
Bra003755 Brassica rapa Bra003755 I 0.853
MTR_1g022495 Medicago truncatula MTR_1g022495 I 0.851
Bo2g083760 Brassica oleracea Bo2g083760 I 0.848
LPERR08G10100 Leersia perrieri LPERR08G10100 N 0.810
BGIOSGA028522 Oryza indica BGIOSGA028522 N 0.808
OBART08G12060 Oryza barthii OBART08G12060 N 0.808
OGLUM08G12880 Oryza glumaepatula OGLUM08G12880 N 0.808
OLONG_022621 Oryza longistaminata OLONG_022621 N 0.808
OMERI08G10040 Oryza meridionalis OMERI08G10040 N 0.808
ONIVA08G12360 Oryza nivara ONIVA08G12360 N 0.808
ORGLA08G0106400 Oryza glaberrima ORGLA08G0106400 N 0.808
ORUFI08G13590 Oryza rufipogon ORUFI08G13590 N 0.808
OB08G20490 Oryza brachyantha OB08G20490 N 0.803
BRADI3G22040 Brachypodium distachyon BRADI3G22040 N 0.799
AtbZIP44 Arabidopsis lyrata scaffold_202483.1 I 0.799
OPUNC08G10970 Oryza punctata OPUNC08G10970 N 0.797
GLYMA17G37180 Glycine max GLYMA17G37180 N 0.795
Thhalv10019604m.g Eutrema salsugineum Thhalv10019604m.g I 0.791
GRMZM2G092137 Zea mays GRMZM2G092137 N 0.790
Sb02g020760 Sorghum bicolor Sb02g020760 N 0.790
Pavir.Bb01636 Panicum virgatum Pavir.Bb01636 N 0.790
BRADI4G27720 Brachypodium distachyon BRADI4G27720 N 0.789
Bostr.3288s0189 Boechera stricta Bostr.3288s0189 I 0.789
LPERR09G03320 Leersia perrieri LPERR09G03320 N 0.787
F775_14757 Aegilops tauschii F775_14757 N 0.784
MLOC_71104 Hordeum vulgare MLOC_71104 N 0.784
Traes_5AL_D9A4DFF71 Triticum aestivum Traes_5AL_D9A4DFF71 N 0.784
Traes_5DL_67A38E9B7 Triticum aestivum Traes_5DL_67A38E9B7 N 0.784
TRIUR3_05083 Triticum urartu TRIUR3_05083 N 0.784