PCHAS_070710 (Plasmodium chabaudi)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PCHAS_070710 T004282_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PF11_0442
M00571_2.00 		Plasmodium falciparum
AGCTAGCT
AGCTAGCT		 PBM
Campbell et al.(2010)
PF11_0442 		0.880 0.981
PF11_0442
M01637_2.00 		Plasmodium falciparum
HVRCTAGYBD
HVRCTAGYBD		 PBM
Weirauch et al.(2014)
pTH7835 		0.880 0.981
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PCHAS_070710:pep AP2 1176 1227

Links

Other AP2 family TFs
Other Plasmodium chabaudi TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR12G03080 Leersia perrieri LPERR12G03080 N
OBART12G03220 Oryza barthii OBART12G03220 N
OB12G13190 Oryza brachyantha OB12G13190 N
ORGLA12G0030500 Oryza glaberrima ORGLA12G0030500 N
BGIOSGA036617 Oryza indica BGIOSGA036617 N
OLONG_000523 Oryza longistaminata OLONG_000523 N
OMERI03G27480 Oryza meridionalis OMERI03G27480 N
ONIVA12G02820 Oryza nivara ONIVA12G02820 N
OPUNC12G03020 Oryza punctata OPUNC12G03020 N
ORUFI12G03660 Oryza rufipogon ORUFI12G03660 N
TGAL11 Oryza sativa OS12G0152900 N