CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PF11_0442
(
Plasmodium falciparum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PF11_0442
T004307_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PF11_0442
M00571_2.00
Plasmodium falciparum
AGCTAGCT
AGCTAGCT
PBM
Campbell et al.(2010)
PF11_0442
(Direct)
(Direct)
PF11_0442
M01637_2.00
Plasmodium falciparum
HVRCTAGYBD
HVRCTAGYBD
PBM
Weirauch et al.(2014)
pTH7835
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.677
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00571_2.00
AP2
40
91
CDVAGVYWDKRSWIASWYDNGKRYYKSFSAKTHGFYKSKFWAIKVRLSKVKG
M01637_2.00
AP2
51
102
CDVAGVYWDKRSWIASWYDNGKRYYKSFSAKTHGFYKSKFWAIKVRLSKVKG
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PF11_0442:pep
AP2
1365
1416
CDVAGVYWDKRSWIASWYDNGKRYYKSFSAKTHGFYKSKFWAIKVRLSKVKG
Links
Other
AP2
family TFs
Other
Plasmodium falciparum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PBANKA_090590
Plasmodium berghei
PBANKA_090590
I
0.880
PCHAS_070710
Plasmodium chabaudi
PCHAS_070710
I
0.880
PKH_094060
Plasmodium knowlesi
PKH_094060
I
0.880
PVX_092760
Plasmodium vivax
PVX_092760
I
0.880
TGME49_016220
Toxoplasma gondii
TGME49_016220
I
0.812
NCLIV_059950
Neospora caninum
NCLIV_059950
I
0.812