POPTR_0001s14720 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0001s14720 T004576_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.857 0.980
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.857 0.980
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.727 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s14720.1 AP2 6 57

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
fgenesh2_kg.1__4183__AT1G51140.1 Arabidopsis lyrata fgenesh2_kg.1__4183__AT1G51140.1 I
BHLH122 Arabidopsis thaliana AT1G51140 D
Bostr.26675s0074 Boechera stricta Bostr.26675s0074 I
Bo4g191390 Brassica oleracea Bo4g191390 I
Bo6g024810 Brassica oleracea Bo6g024810 I
Bra016886 Brassica rapa Bra016886 I
Bra018896 Brassica rapa Bra018896 I
PK20089.1 Cannabis sativa PK20089.1 I
Cagra.2093s0006 Capsella grandiflora Cagra.2093s0006 I
Carubv10009458m.g Capsella rubella Carubv10009458m.g I
Ca_02662 Cicer arietinum Ca_02662 I
Ca_14223 Cicer arietinum Ca_14223 I
Ciclev10015437m.g Citrus clementina Ciclev10015437m.g I
orange1.1g015337m.g Citrus sinensis orange1.1g015337m.g I
Eucgr.B03669 Eucalyptus grandis Eucgr.B03669 I
Thhalv10011463m.g Eutrema salsugineum Thhalv10011463m.g I
GLYMA15G03740 Glycine max GLYMA15G03740 I
GLYMA13G41670 Glycine max GLYMA13G41670 I
GLYMA12G05930 Glycine max GLYMA12G05930 I
GLYMA11G13960 Glycine max GLYMA11G13960 I
Gorai.009G071900 Gossypium raimondii Gorai.009G071900 I
MTR_2g098310 Medicago truncatula MTR_2g098310 I
GSMUA_Achr9G27780_001 Musa acuminata GSMUA_Achr9G27780_001 I
PDK_20s1302565g001 Phoenix dactylifera PDK_20s1302565g001 I
fgenesh1_pg.scaffold_155000050 Physcomitrella patens fgenesh1_pg.scaffold_155000050 I
TCM_040564 Theobroma cacao TCM_040564 I