scaffold_601912.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 scaffold_601912.1 T005105_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.807 1.000
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.724 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.724 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.724 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.704 0.796
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.695 0.796
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.682 0.776
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.680 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_601912.1 AP2 32 83

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001635 Acyrthosiphon pisum ACYPI001635 N
AAEL002343 Aedes aegypti AAEL002343 N
AAEL014740 Aedes aegypti AAEL014740 N
ENSAMEG00000018716 Ailuropoda melanoleuca ENSAMEG00000018716 N
Alligator_sinensis_CCG000862.1 Alligator sinensis Alligator_sinensis_CCG000862.1 N
ENSAPLG00000000714 Anas platyrhynchos ENSAPLG00000000714 N
AALB007750 Anopheles albimanus AALB007750 N
AARA001122 Anopheles arabiensis AARA001122 N
AATE003730 Anopheles atroparvus AATE003730 N
ACOM029080 Anopheles coluzzii ACOM029080 N
ACUA021406 Anopheles culicifacies ACUA021406 N
ADAC003908 Anopheles darlingi ADAC003908 N
ADIR001051 Anopheles dirus ADIR001051 N
AEPI007278 Anopheles epiroticus AEPI007278 N
AFAF017713 Anopheles farauti AFAF017713 N
AFUN004699 Anopheles funestus AFUN004699 N
AGAP000056 Anopheles gambiae AGAP000056 N
AMAM000698 Anopheles maculatus AMAM000698 N
AMEC022213 Anopheles melas AMEC022213 N
AMEM001368 Anopheles merus AMEM001368 N
AMIN002121 Anopheles minimus AMIN002121 N
AQUA005712 Anopheles quadriannulatus AQUA005712 N
ASIS013948 Anopheles sinensis ASIS013948 N
ASTEI06194 Anopheles stephensi ASTEI06194 N
GB52114 Apis mellifera GB52114 N
Afo_R000495 Aptenodytes forsteri Afo_R000495 N
ENSAMXG00000020327 Astyanax mexicanus ENSAMXG00000020327 N
BGLB001139 Biomphalaria glabrata BGLB001139 N
ENSP00000348460-D1 Bos grunniens ENSP00000348460-D1 N
NPAS1 Bos taurus ENSBTAG00000015576 N
gw.84.113.1 Branchiostoma floridae gw.84.113.1 N
Brh_R013374 Buceros rhinoceros Brh_R013374 N
NPAS3 Callithrix jacchus ENSCJAG00000005437 N
NPAS1 Callithrix jacchus ENSCJAG00000011666 N
Aan_R007988 Calypte anna Aan_R007988 N
Cflo_02462--XP_391937.2_APIME Camponotus floridanus Cflo_02462--XP_391937.2_APIME N
NPAS1 Canis familiaris ENSCAFG00000032405 N
NPAS3 Cavia porcellus ENSCPOG00000006976 N
NPAS1 Cavia porcellus ENSCPOG00000023069 N
Cmyd_10005570 Chelonia mydas Cmyd_10005570 N
ENSCSAG00000003006 Chlorocebus sabaeus ENSCSAG00000003006 N
NPAS3 Choloepus hoffmanni ENSCHOG00000013756 N
CLEC007310 Cimex lectularius CLEC007310 N
CGI_10014877 Crassostrea gigas CGI_10014877 N
CpipJ_CPIJ006378 Culex pipiens CpipJ_CPIJ006378 N
CPIJ006378 Culex quinquefasciatus CPIJ006378 N
npas1 Danio rerio ENSDARG00000015876 N
DAPPUDRAFT_59022 Daphnia pulex DAPPUDRAFT_59022 N
NPAS1 Dasypus novemcinctus ENSDNOG00000035321 N
Npas3 Dipodomys ordii ENSDORG00000000860 N
GF24890 Drosophila ananassae FBgn0101882 N
GG14662 Drosophila erecta FBgn0106918 N
GH15456 Drosophila grimshawi FBgn0122928 N
GH23748 Drosophila grimshawi FBgn0131205 N
trh Drosophila melanogaster FBgn0262139 N
GI16736 Drosophila mojavensis FBgn0139484 N
GA19928 Drosophila pseudoobscura FBgn0079924 N
trh Drosophila sechellia FBgn0025046 N
GD25707 Drosophila simulans FBgn0196992 N
GJ12482 Drosophila virilis FBgn0199724 N
GK20151 Drosophila willistoni FBgn0222148 N
GE21022 Drosophila yakuba FBgn0238304 N
NPAS3 Echinops telfairi ENSETEG00000016603 N
ENSECAG00000004630 Equus caballus ENSECAG00000004630 N
NPAS3 Erinaceus europaeus ENSEEUG00000006528 N
NPAS1 Felis catus ENSFCAG00000004833 N
ENSGMOG00000016149 Gadus morhua ENSGMOG00000016149 N
NPAS3 Gallus gallus ENSGALG00000029022 N
npas1 Gasterosteus aculeatus ENSGACG00000009494 N
Gfo_R012966 Geospiza fortis Gfo_R012966 N
NPAS1 Gorilla gorilla ENSGGOG00000013398 N
NPAS3 Gorilla gorilla ENSGGOG00000022941 N
Hsal_10736--XP_391937.2_APIME Harpegnathos saltator Hsal_10736--XP_391937.2_APIME N
HelroG63031 Helobdella robusta HelroG63031 N
NPAS1 Homo sapiens ENSG00000130751 N
NPAS3 Homo sapiens ENSG00000151322 N
ENSSTOG00000003396 Ictidomys tridecemlineatus ENSSTOG00000003396 N
ENSSTOG00000014736 Ictidomys tridecemlineatus ENSSTOG00000014736 N
ISCW018625 Ixodes scapularis ISCW018625 N
ENSLACG00000001145 Latimeria chalumnae ENSLACG00000001145 N
ENSLOCG00000009512 Lepisosteus oculatus ENSLOCG00000009512 N
ENSLOCG00000014899 Lepisosteus oculatus ENSLOCG00000014899 N
LDEC011477 Leptinotarsa decemlineata LDEC011477 N
LotgiG127403 Lottia gigantea LotgiG127403 N
NPAS3 Loxodonta africana ENSLAFG00000007169 N
LCUP010821 Lucilia cuprina LCUP010821 N
ENSP00000348460 Macaca fascicularis ENSP00000348460 N
ENSP00000405290 Macaca fascicularis ENSP00000405290 N
NPAS1 Macaca mulatta ENSMMUG00000011330 N
NPAS3 Macaca mulatta ENSMMUG00000014839 N
ENSMEUG00000000606 Macropus eugenii ENSMEUG00000000606 N
ENSMEUG00000012966 Macropus eugenii ENSMEUG00000012966 N
ENSMGAG00000016559 Meleagris gallopavo ENSMGAG00000016559 N
MCINX015160 Melitaea cinxia MCINX015160 N
ENSMICG00000000605 Microcebus murinus ENSMICG00000000605 N
NPAS1 Microcebus murinus ENSMICG00000006346 N
NPAS1 Monodelphis domestica ENSMODG00000009053 N
ENSMODG00000024103 Monodelphis domestica ENSMODG00000024103 N
MDOA009035 Musca domestica MDOA009035 N
ENSMPUG00000001046 Mustela putorius furo ENSMPUG00000001046 N
ENSMPUG00000005118 Mustela putorius furo ENSMPUG00000005118 N
Npas1 Mus musculus ENSMUSG00000001988 N
Npas3 Mus musculus ENSMUSG00000021010 N
NV13641 Nasonia vitripennis NV13641 N
NV16594 Nasonia vitripennis NV16594 I
NEMVEDRAFT_v1g96877 Nematostella vectensis NEMVEDRAFT_v1g96877 N
ENSNLEG00000002946 Nomascus leucogenys ENSNLEG00000002946 N
ENSNLEG00000003239 Nomascus leucogenys ENSNLEG00000003239 N
NPAS3 Ochotona princeps ENSOPRG00000008184 N
NPAS1 Ochotona princeps ENSOPRG00000014860 N
Ocbimv22029779m.g Octopus bimaculoides Ocbimv22029779m.g N
ENSOANG00000014043 Ornithorhynchus anatinus ENSOANG00000014043 N
ENSORLG00000006931 Oryzias latipes ENSORLG00000006931 N
NPAS3 Oryzias latipes ENSORLG00000018065 N
NPAS1 Otolemur garnettii ENSOGAG00000012829 N
NPAS3 Otolemur garnettii ENSOGAG00000014886 N
ENSOARG00000010869 Ovis aries ENSOARG00000010869 N
NPAS3 Pan troglodytes ENSPTRG00000006249 N
NPAS1 Pan troglodytes ENSPTRG00000011199 N
ENSPANG00000014704 Papio anubis ENSPANG00000014704 N
PHUM613040 Pediculus humanus PHUM613040 N
ENSPSIG00000017052 Pelodiscus sinensis ENSPSIG00000017052 N
ENSPMAG00000007632 Petromyzon marinus ENSPMAG00000007632 N
ENSPFOG00000008940 Poecilia formosa ENSPFOG00000008940 N
Pvit_04747 Pogona vitticeps Pvit_04747 N
ENSPPYG00000010165 Pongo abelii ENSPPYG00000010165 N
ENSPCAG00000000784 Procavia capensis ENSPCAG00000000784 N
NPAS3 Procavia capensis ENSPCAG00000007391 N
Npas1 Rattus norvegicus ENSRNOG00000015376 N
Sakowv30006415m.g Saccoglossus kowalevskii Sakowv30006415m.g N
ENSSHAG00000011475 Sarcophilus harrisii ENSSHAG00000011475 N
NPAS3 Sorex araneus ENSSARG00000003164 N
ENSSARG00000014127 Sorex araneus ENSSARG00000014127 N
SMAR015279 Strigamia maritima SMAR015279 N
SPU_014249 Strongylocentrotus purpuratus SPU_014249 N
NPAS1 Sus scrofa ENSSSCG00000003108 N
ENSSSCG00000024473 Sus scrofa ENSSSCG00000024473 N
ENSTGUG00000011911 Taeniopygia guttata ENSTGUG00000011911 N
npas1 Takifugu rubripes ENSTRUG00000012318 N
tetur01g16040 Tetranychus urticae tetur01g16040 N
TC001448 Tribolium castaneum TC001448 N
NPAS3 Tupaia belangeri ENSTBEG00000016041 N
NPAS3 Tursiops truncatus ENSTTRG00000003266 N
NPAS1 Tursiops truncatus ENSTTRG00000011416 N
Tal_R006980 Tyto alba Tal_R006980 N
NPAS3 Vicugna pacos ENSVPAG00000001108 N
npas3 Xenopus tropicalis XB-GENE-999791 N
ENSXMAG00000004213 Xiphophorus maculatus ENSXMAG00000004213 N
L798_01241 Zootermopsis nevadensis L798_01241 N