Solyc04g080910.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc04g080910.1 T005463_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.693 0.837
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.693 0.837
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.693 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g080910.1.1 AP2 29 80

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G06567 Brachypodium distachyon BRADI4G06567 N
BRADI4G12615 Brachypodium distachyon BRADI4G12615 N
Ca_05643 Cicer arietinum Ca_05643 N
gene12191-v1.0-hybrid Fragaria vesca gene12191-v1.0-hybrid N
chr5.CM0200.500.nc Lotus japonicus chr5.CM0200.500.nc N
chr5.CM0200.490.nc Lotus japonicus chr5.CM0200.490.nc N
MTR_1g106470 Medicago truncatula MTR_1g106470 N
OBART11G20580 Oryza barthii OBART11G20580 N
OBART12G13380 Oryza barthii OBART12G13380 N
OB11G25500 Oryza brachyantha OB11G25500 N
ORGLA12G0196200 Oryza glaberrima ORGLA12G0196200 N
ORGLA11G0169400 Oryza glaberrima ORGLA11G0169400 N
OGLUM11G20000 Oryza glumaepatula OGLUM11G20000 N
OGLUM12G15010 Oryza glumaepatula OGLUM12G15010 N
BGIOSGA035596 Oryza indica BGIOSGA035596 N
BGIOSGA037460 Oryza indica BGIOSGA037460 N
OLONG_021754 Oryza longistaminata OLONG_021754 N
ONIVA11G20620 Oryza nivara ONIVA11G20620 N
OPUNC11G17200 Oryza punctata OPUNC11G17200 N
OPUNC12G12060 Oryza punctata OPUNC12G12060 N
ORUFI11G22390 Oryza rufipogon ORUFI11G22390 N
ORUFI12G14590 Oryza rufipogon ORUFI12G14590 N
OS11G0634700 Oryza sativa OS11G0634700 N
Pavir.Hb00249 Panicum virgatum Pavir.Hb00249 N
Pavir.Ha00126 Panicum virgatum Pavir.Ha00126 N
Pavir.Cb00430 Panicum virgatum Pavir.Cb00430 N
Pavir.Ca02532 Panicum virgatum Pavir.Ca02532 N
Pavir.Ca02388 Panicum virgatum Pavir.Ca02388 N
Pavir.Ia01481 Panicum virgatum Pavir.Ia01481 N
Pavir.Ib03951 Panicum virgatum Pavir.Ib03951 N
Si038695m.g Setaria italica Si038695m.g N
Si028242m.g Setaria italica Si028242m.g N
Si024550m.g Setaria italica Si024550m.g N
Si022813m.g Setaria italica Si022813m.g N
Solyc10g049720.1 Solanum lycopersicum Solyc10g049720.1 N
Sb08g019780 Sorghum bicolor Sb08g019780 N
Sb01g014580 Sorghum bicolor Sb01g014580 N
TRAES3BF169000100CFD_g Triticum aestivum TRAES3BF169000100CFD_g N
Traes_3DL_801E89185 Triticum aestivum Traes_3DL_801E89185 N
TRIUR3_10349 Triticum urartu TRIUR3_10349 N
GRMZM2G165188 Zea mays GRMZM2G165188 N
AC198518.3_FG005 Zea mays AC198518.3_FG005 N