Solyc08g007820.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc08g007820.1 T005497_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.739 0.780
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.739 0.780
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.739 0.780
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.739 0.780
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.739 0.780
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.739 0.780
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.731 0.780
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.731 0.780
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.731 0.780
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.731 0.780
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.711 0.740
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.702 0.740
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.702 0.740
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.701 0.760
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.701 0.760
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.695 0.760
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.695 0.760
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.695 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc08g007820.1.1 AP2 49 100

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

152 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CADAFLAG00008683 Aspergillus flavus CADAFLAG00008683 N
ANIA_05775 Aspergillus nidulans CADANIAG00003279 N
BAUCODRAFT_39585 Baudoinia compniacensis BAUCODRAFT_39585 N
A1O1_01367 Capronia coronata A1O1_01367 N
A1O1_07238 Capronia coronata A1O1_07238 N
A1O1_05514 Capronia coronata A1O1_05514 N
A1O3_09130 Capronia epimyces A1O3_09130 N
A1O3_04485 Capronia epimyces A1O3_04485 N
PV04_00511 Capronia semiimmersa PV04_00511 N
Z519_00518 Cladophialophora bantiana Z519_00518 N
G647_01519 Cladophialophora carrionii G647_01519 N
G647_08938 Cladophialophora carrionii G647_08938 N
A1O5_00510 Cladophialophora psammophila A1O5_00510 N
A1O7_01450 Cladophialophora yegresii A1O7_01450 N
A1O7_02428 Cladophialophora yegresii A1O7_02428 N
DOTSEDRAFT_75032 Dothistroma septosporum DOTSEDRAFT_75032 N
HMPREF1120_07748 Exophiala dermatitidis HMPREF1120_07748 N
HMPREF1120_05306 Exophiala dermatitidis HMPREF1120_05306 N
PV10_03009 Exophiala mesophila PV10_03009 N
PV06_06048 Exophiala oligosperma PV06_06048 N
PV06_10331 Exophiala oligosperma PV06_10331 N
PV11_10054 Exophiala sideris PV11_10054 N
PV05_10000 Exophiala xenobiotica PV05_10000 N
PV05_11665 Exophiala xenobiotica PV05_11665 N
FFUJ_11321 Fusarium fujikuroi FFUJ_11321 N
PAAG_00881 Paracoccidioides sp lutzii PAAG_00881 N
Pc14g01370 Penicillium chrysogenum Pc14g01370 N
Pc21g06560 Penicillium chrysogenum Pc21g06560 N
PDE_02517 Penicillium oxalicum PDE_02517 N
PCH_Pc14g01370 Penicillium rubens PCH_Pc14g01370 N
PCH_Pc21g06560 Penicillium rubens PCH_Pc21g06560 N
Z518_05059 Rhinocladiella mackenziei Z518_05059 N