27810.m000639 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 27810.m000639 T006677_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.815 0.980
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.765 0.900
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.685 0.780
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.681 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
27810.m000639 AP2 28 79

Links

Other AP2 family TFs
Other Ricinus communis TFs

118 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BXY_1519700 Bursaphelenchus xylophilus BXY_1519700 N
nLs.2.1.2.g08650 Litomosoides sigmodontis nLs.2.1.2.g08650 N
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf15800-processed-gene-0.1 N
MhA1_Contig33.frz3.gene10 Meloidogyne hapla MhA1_Contig33.frz3.gene10 N
Minc02504 Meloidogyne incognita Minc02504 N