e_gw1.66.94.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 e_gw1.66.94.1 T007168_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.902 0.886
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.902 0.886
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.887 0.914
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.887 0.914
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.883 0.895
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.883 0.895
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.872 0.876
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.872 0.876
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.66.94.1 AP2 58 118
e_gw1.66.94.1 AP2 160 212

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

620 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00119300 Amborella trichopoda AMTR_s00057p00119300 N 0.000
AMTR_s00147p00088570 Amborella trichopoda AMTR_s00147p00088570 N 0.000
Aquca_012_00145 Aquilegia coerulea Aquca_012_00145 N 0.000
ETC1 Arabidopsis lyrata Al_scaffold_0001_92 N 0.000
ETC1 Arabidopsis thaliana AT1G01380 N 0.000
Bostr.5325s0057 Boechera stricta Bostr.5325s0057 N 0.000
PK11198.1 Cannabis sativa PK11198.1 N 0.000
Cagra.1968s0081 Capsella grandiflora Cagra.1968s0081 N 0.000
Carubv10011382m.g Capsella rubella Carubv10011382m.g N 0.000
evm.TU.contig_29502 Carica papaya evm.TU.contig_29502 N 0.000
Ciclev10017220m.g Citrus clementina Ciclev10017220m.g N 0.000
Eucgr.A01720 Eucalyptus grandis Eucgr.A01720 N 0.000
Eucgr.K00803 Eucalyptus grandis Eucgr.K00803 N 0.000
Eucgr.K00332 Eucalyptus grandis Eucgr.K00332 N 0.000
Eucgr.D01323 Eucalyptus grandis Eucgr.D01323 N 0.000
gene23919-v1.0-hybrid Fragaria vesca gene23919-v1.0-hybrid N 0.000
GLYMA06G45941 Glycine max GLYMA06G45941 N 0.000
GLYMA12G10790 Glycine max GLYMA12G10790 N 0.000
GLYMA12G32130 Glycine max GLYMA12G32130 N 0.000
Gorai.010G253000 Gossypium raimondii Gorai.010G253000 N 0.000
Gorai.002G083400 Gossypium raimondii Gorai.002G083400 N 0.000
Gorai.008G172400 Gossypium raimondii Gorai.008G172400 N 0.000
Gorai.010G252300 Gossypium raimondii Gorai.010G252300 N 0.000
MDP0000270078 Malus domestica MDP0000270078 N 0.000
MDP0000499190 Malus domestica MDP0000499190 N 0.000
MDP0000216918 Malus domestica MDP0000216918 N 0.000
cassava23226.valid.m1 Manihot esculenta cassava23226.valid.m1 N 0.000
cassava4691.m1 Manihot esculenta cassava4691.m1 N 0.000
cassava24286.valid.m1 Manihot esculenta cassava24286.valid.m1 N 0.000
cassava24285.valid.m1 Manihot esculenta cassava24285.valid.m1 N 0.000
cassava23225.valid.m1 Manihot esculenta cassava23225.valid.m1 N 0.000
cassava11157.m1 Manihot esculenta cassava11157.m1 N 0.000
cassava10382.m1 Manihot esculenta cassava10382.m1 N 0.000
MTR_4g046737 Medicago truncatula MTR_4g046737 N 0.000
mgf009009m Mimulus guttatus mgf009009m N 0.000
GSMUA_Achr10G09220_001 Musa acuminata GSMUA_Achr10G09220_001 N 0.000
PDK_20s1335581g001 Phoenix dactylifera PDK_20s1335581g001 N 0.000
PDK_20s1307674g001 Phoenix dactylifera PDK_20s1307674g001 N 0.000
POPTR_0017s06470 Populus trichocarpa POPTR_0017s06470 N 0.000
POPTR_0004s02060 Populus trichocarpa POPTR_0004s02060 N 0.000
POPTR_0007s02510 Populus trichocarpa POPTR_0007s02510 N 0.000
POPTR_0011s00390 Populus trichocarpa POPTR_0011s00390 N 0.000
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N 0.000
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N 0.000
Pm009748 Prunus mume Pm009748 N 0.000
PRUPE_ppa023926mg Prunus persica PRUPE_ppa023926mg N 0.000
PRUPE_ppa014728mg Prunus persica PRUPE_ppa014728mg N 0.000
29842.m003592 Ricinus communis 29842.m003592 N 0.000
30169.m006531 Ricinus communis 30169.m006531 N 0.000
30086.m000210 Ricinus communis 30086.m000210 N 0.000
29842.m003644 Ricinus communis 29842.m003644 N 0.000
SapurV1A.1227s0050 Salix purpurea SapurV1A.1227s0050 N 0.000
SapurV1A.1106s0040 Salix purpurea SapurV1A.1106s0040 N 0.000
SapurV1A.0345s0340 Salix purpurea SapurV1A.0345s0340 N 0.000
SapurV1A.0346s0010 Salix purpurea SapurV1A.0346s0010 N 0.000
SapurV1A.0377s0050 Salix purpurea SapurV1A.0377s0050 N 0.000
SapurV1A.0610s0050 Salix purpurea SapurV1A.0610s0050 N 0.000
SapurV1A.0722s0160 Salix purpurea SapurV1A.0722s0160 N 0.000
SapurV1A.0779s0100 Salix purpurea SapurV1A.0779s0100 N 0.000
SapurV1A.0928s0060 Salix purpurea SapurV1A.0928s0060 N 0.000
Solyc07g052490.2 Solanum lycopersicum Solyc07g052490.2 N 0.000
TCM_015351 Theobroma cacao TCM_015351 N 0.000
TCM_046858 Theobroma cacao TCM_046858 N 0.000
TCM_011327 Theobroma cacao TCM_011327 N 0.000
TCM_030163 Theobroma cacao TCM_030163 N 0.000
TCM_030224 Theobroma cacao TCM_030224 N 0.000
VIT_12s0059g02360 Vitis vinifera VIT_12s0059g02360 N 0.000
VIT_10s0116g01760 Vitis vinifera VIT_10s0116g01760 N 0.000
VIT_10s0116g00500 Vitis vinifera VIT_10s0116g00500 N 0.000