gw1.120.55.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.120.55.1 T007254_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.713 0.837
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.711 0.796
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.705 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.705 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.705 0.816
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.692 0.796
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.686 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.120.55.1 AP2 36 87

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

195 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000018694 Ailuropoda melanoleuca ENSAMEG00000018694 N
Afo_R010054 Aptenodytes forsteri Afo_R010054 N
Afo_R000657 Aptenodytes forsteri Afo_R000657 N
ENSAMXG00000017686 Astyanax mexicanus ENSAMXG00000017686 N
BGLB010770 Biomphalaria glabrata BGLB010770 N
ENSBTAP00000010868-D3 Bos grunniens ENSBTAP00000010868-D3 N
gw.66.125.1 Branchiostoma floridae gw.66.125.1 N
Brh_R003300 Buceros rhinoceros Brh_R003300 N
Brh_R012220 Buceros rhinoceros Brh_R012220 N
Brh_R008816 Buceros rhinoceros Brh_R008816 N
Aan_R011702 Calypte anna Aan_R011702 N
Aan_R013281 Calypte anna Aan_R013281 N
Cflo_07826--XP_624996.2_APIME Camponotus floridanus Cflo_07826--XP_624996.2_APIME N
Cmyd_10006710 Chelonia mydas Cmyd_10006710 N
Cmyd_10014201 Chelonia mydas Cmyd_10014201 N
CLEC007919 Cimex lectularius CLEC007919 N
CGOC_0000046201 Cylicostephanus goldi CGOC_0000046201 N
EVEC_0000948101 Enterobius vermicularis EVEC_0000948101 N
Gfo_R007594 Geospiza fortis Gfo_R007594 N
Gfo_R003038 Geospiza fortis Gfo_R003038 N
GPUH_0000232301 Gongylonema pulchrum GPUH_0000232301 N
HPLM_0000364101 Haemonchus placei HPLM_0000364101 N
HHAL003722-PA Halyomorpha halys HHAL003722-PA N
HelroG65724 Helobdella robusta HelroG65724 N
HDID_0000181401 Hymenolepis diminuta HDID_0000181401 N
ISCW015625 Ixodes scapularis ISCW015625 N
ENSMMUP00000032000 Macaca fascicularis ENSMMUP00000032000 N
ENSMMUG00000000191 Macaca mulatta ENSMMUG00000000191 N
ENSMGAG00000006142 Meleagris gallopavo ENSMGAG00000006142 N
MCOS_0000769201 Mesocestoides corti MCOS_0000769201 N
ENSMICG00000001025 Microcebus murinus ENSMICG00000001025 N
Myotis_brandtii_Onecut1_10025995 Myotis brandtii Myotis_brandtii_Onecut1_10025995 N
Ocbimv22034216m.g Octopus bimaculoides Ocbimv22034216m.g N
Ogr02782 Ophisaurus gracilis Ogr02782 N
Ogr01623 Ophisaurus gracilis Ogr01623 N
ENSOANG00000014925 Ornithorhynchus anatinus ENSOANG00000014925 N
ENSOANG00000008148 Ornithorhynchus anatinus ENSOANG00000008148 N
PEQ_0000468501 Parascaris equorum PEQ_0000468501 N
Pvit_17411 Pogona vitticeps Pvit_17411 N
scaffold144-EXSNAP2012.48 Pristionchus exspectatus scaffold144-EXSNAP2012.48 N
Onecut3 Rattus norvegicus ENSRNOG00000059889 N
nRc.2.0.1.g06030 Romanomermis culicivorax nRc.2.0.1.g06030 N
SMRZ_0002529501 Schistosoma margrebowiei SMRZ_0002529501 N
SMTD_0000798901 Schistosoma mattheei SMTD_0000798901 N
SROB_0000955701 Schistosoma rodhaini SROB_0000955701 N
SMUV_0001032901 Syphacia muris SMUV_0001032901 N
TELCIR_14748 Teladorsagia circumcincta TELCIR_14748 N
TELCIR_12105 Teladorsagia circumcincta TELCIR_12105 N
ENSTNIG00000004331 Tetraodon nigroviridis ENSTNIG00000004331 N
D917_03505 Trichinella nativa D917_03505 N
EFV55313 Trichinella spiralis EFV55313 N
D918_08253 Trichuris suis D918_08253 N
Tal_R009878 Tyto alba Tal_R009878 N
Tal_R009917 Tyto alba Tal_R009917 N
L798_07539 Zootermopsis nevadensis L798_07539 N