CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.340.39.1
(
Physcomitrella patens
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
gw1.340.39.1
T007292_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.340.39.1
AP2
1
51
AYRGVRKRPWGRWSAEIRDKIGKCRHWLGTFDTAEDAARAYDAAARRLRGA
Links
Other
AP2
family TFs
Other
Physcomitrella patens
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M378DRAFT_42727
Amanita muscaria
M378DRAFT_42727
N
BOTBODRAFT_76690
Botryobasidium botryosum
BOTBODRAFT_76690
N
BOTBODRAFT_73079
Botryobasidium botryosum
BOTBODRAFT_73079
N
DACRYDRAFT_52998
Dacryopinax sp
DACRYDRAFT_52998
N
DICSQDRAFT_31039
Dichomitus squalens
DICSQDRAFT_31039
N
FOMPIDRAFT_1091714
Fomitopsis pinicola
FOMPIDRAFT_1091714
N
GYMLUDRAFT_107672
Gymnopus luxurians
GYMLUDRAFT_107672
N
M413DRAFT_71958
Hebeloma cylindrosporum
M413DRAFT_71958
N
HETIRDRAFT_248182
Heterobasidion irregulare
HETIRDRAFT_248182
N
HYDPIDRAFT_46608
Hydnomerulius pinastri
HYDPIDRAFT_46608
N
JAAARDRAFT_132180
Jaapia argillacea
JAAARDRAFT_132180
N
MPER_04209
Moniliophthora perniciosa
MPER_04209
N
PHACADRAFT_172347
Phanerochaete carnosa
PHACADRAFT_172347
N
PILCRDRAFT_57008
Piloderma croceum
PILCRDRAFT_57008
N
PILCRDRAFT_82466
Piloderma croceum
PILCRDRAFT_82466
N
PISMIDRAFT_80466
Pisolithus microcarpus
PISMIDRAFT_80466
N
M404DRAFT_88423
Pisolithus tinctorius
M404DRAFT_88423
N
PLEOSDRAFT_1026938
Pleurotus ostreatus
PLEOSDRAFT_1026938
N
SERLA73DRAFT_50420
Serpula lacrymans
SERLA73DRAFT_50420
N
M422DRAFT_119565
Sphaerobolus stellatus
M422DRAFT_119565
N