Bostr.2021s0122 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.2021s0122 T007596_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.771 0.837
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.758 0.816
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.758 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.2021s0122.1.p AP2 212 262

Links

Other AP2 family TFs
Other Boechera stricta TFs

426 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCEY_07283 Ancylostoma ceylanicum ANCCEY_07283 I 0.000
ANCCEY_07282 Ancylostoma ceylanicum ANCCEY_07282 N 0.000
ANCDUO_26474 Ancylostoma duodenale ANCDUO_26474 N 0.000
ANCDUO_02766 Ancylostoma duodenale ANCDUO_02766 N 0.000
ACAC_0000770601 Angiostrongylus cantonensis ACAC_0000770601 N 0.000
ASIM_0000382801 Anisakis simplex ASIM_0000382801 N 0.000
ALUE_0002350801 Ascaris lumbricoides ALUE_0002350801 I 0.000
ACEP15405 Atta cephalotes ACEP15405 I 0.000
CBN19319 Caenorhabditis brenneri CBN19319 N 0.000
CBG02662 Caenorhabditis briggsae CBG02662 N 0.000
aptf-1 Caenorhabditis elegans WBGene00019424 N 0.000
CJA15225 Caenorhabditis japonica CJA15225 N 0.000
CRE26538 Caenorhabditis remanei CRE26538 N 0.000
tfap2b Danio rerio ENSDARG00000012667 I 0.000
tfap2c Danio rerio ENSDARG00000040606 I 0.000
DICVIV_00217 Dictyocaulus viviparus DICVIV_00217 N 0.000
EmuJ_000457200 Echinococcus multilocularis EmuJ_000457200 I 0.000
ENSETEG00000009017 Echinops telfairi ENSETEG00000009017 I 0.000
ECPE_0000534101 Echinostoma caproni ECPE_0000534101 I 0.000
EVEC_0000221401 Enterobius vermicularis EVEC_0000221401 I 0.000
D915_00208 Fasciola hepatica D915_00208 I 0.000
ENSFCAG00000013878 Felis catus ENSFCAG00000013878 I 0.000
ENSGMOG00000009513 Gadus morhua ENSGMOG00000009513 I 0.000
ENSGACG00000002672 Gasterosteus aculeatus ENSGACG00000002672 I 0.000
GPLIN_001548200 Globodera pallida GPLIN_001548200 I 0.000
GPUH_0002219901 Gongylonema pulchrum GPUH_0002219901 I 0.000
HCOI00892700 Haemonchus contortus HCOI00892700 N 0.000
HPLM_0001199101 Haemonchus placei HPLM_0001199101 N 0.000
Hsal_09862--XP_394369.3_APIME Harpegnathos saltator Hsal_09862--XP_394369.3_APIME I 0.000
Hba_16110 Heterorhabditis bacteriophora Hba_16110 N 0.000
TFAP2A Homo sapiens ENSG00000137203 D 0.000
ENSMEUG00000007703 Macropus eugenii ENSMEUG00000007703 I 0.000
MCINX002204 Melitaea cinxia MCINX002204 I 0.000
genemark-nMf.1.1.scaf12791-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf12791-processed-gene-0.1 I 0.000
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf31395-processed-gene-0.2 I 0.000
MhA1_Contig1235.frz3.gene9 Meloidogyne hapla MhA1_Contig1235.frz3.gene9 I 0.000
TFAP2D Microcebus murinus ENSMICG00000005507 I 0.000
NECAME_08596 Necator americanus NECAME_08596 N 0.000
OESDEN_04908 Oesophagostomum dentatum OESDEN_04908 N 0.000
nOo.2.0.1.g09186 Onchocerca ochengi nOo.2.0.1.g09186 I 0.000
T265_12481 Opisthorchis viverrini T265_12481 I 0.000
PEQ_0000626601 Parascaris equorum PEQ_0000626601 I 0.000
scaffold16-EXSNAP2012.142 Pristionchus exspectatus scaffold16-EXSNAP2012.142 I 0.000
ENSPCAG00000015999 Procavia capensis ENSPCAG00000015999 I 0.000
Sakowv30010957m.g Saccoglossus kowalevskii Sakowv30010957m.g I 0.000
SSLN_0000471801 Schistocephalus solidus SSLN_0000471801 I 0.000
SMTD_0001395301 Schistosoma mattheei SMTD_0001395301 I 0.000
ENSSARG00000001996 Sorex araneus ENSSARG00000001996 I 0.000
SPER_0000909201 Spirometra erinaceieuropaei SPER_0000909201 I 0.000
SVUK_0001049301 Strongylus vulgaris SVUK_0001049301 N 0.000
TsM_000500400 Taenia solium TsM_000500400 I 0.000
TELCIR_24906 Teladorsagia circumcincta TELCIR_24906 I 0.000
TELCIR_10519 Teladorsagia circumcincta TELCIR_10519 N 0.000
TELCIR_17574 Teladorsagia circumcincta TELCIR_17574 N 0.000
D917_08051 Trichinella nativa D917_08051 I 0.000
D918_05204 Trichuris suis D918_05204 I 0.000
TTRE_0000281201 Trichuris trichiura TTRE_0000281201 I 0.000
ENSXMAG00000003446 Xiphophorus maculatus ENSXMAG00000003446 I 0.000