Cagra.1822s0022 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.1822s0022 T007747_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF11
M01606_2.00 		Arabidopsis thaliana
NHGCCGNHNN
NNDNCGGCDN		 PBM
Weirauch et al.(2014)
pTH8117 		0.702 0.941
ERF11
M06575_2.00 		Arabidopsis thaliana
NHNNHDSCGCCGYCRHHNNN
NNNDDYGRCGGCGSHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF11_colamp_a 		0.702 0.941
ERF11
M06576_2.00 		Arabidopsis thaliana
NHNYCKCCGCCGYHD
HDRCGGCGGMGRNDN		 Dap-seq
OMalley et al.(2016)
ERF11_col_b 		0.702 0.941
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1822s0022.1.p AP2 18 69

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000009354 Ailuropoda melanoleuca ENSAMEG00000009354 I
ENSAPLG00000011365 Anas platyrhynchos ENSAPLG00000011365 I
ZNF385D Anolis carolinensis ENSACAG00000000013 I
Afo_R015463 Aptenodytes forsteri Afo_R015463 I
ENSP00000281523-D2 Bos grunniens ENSP00000281523-D2 I
ZNF385D Callithrix jacchus ENSCJAG00000003774 I
Aan_R007611 Calypte anna Aan_R007611 I
ZNF385D Canis familiaris ENSCAFG00000005795 I
ZNF385D Equus caballus ENSECAG00000012368 I
ZNF385D Erinaceus europaeus ENSEEUG00000014323 I
ZNF385D Felis catus ENSFCAG00000027175 I
ENSFALG00000009217 Ficedula albicollis ENSFALG00000009217 I
ZNF385D Gallus gallus ENSGALG00000011283 I
Gfo_R006945 Geospiza fortis Gfo_R006945 I
ZNF385D Gorilla gorilla ENSGGOG00000001637 I
ZNF385D Homo sapiens ENSG00000151789 D
ENSP00000281523 Macaca fascicularis ENSP00000281523 I
ZNF385D Macaca mulatta ENSMMUG00000009667 I
ZNF385D Microcebus murinus ENSMICG00000000501 I
ENSMPUG00000012185 Mustela putorius furo ENSMPUG00000012185 I
ZNF385D Myotis lucifugus ENSMLUG00000014625 I
ENSNLEG00000003543 Nomascus leucogenys ENSNLEG00000003543 I
ZNF385D Oryctolagus cuniculus ENSOCUG00000029070 I
ZNF385D Otolemur garnettii ENSOGAG00000015958 I
ENSOARG00000004647 Ovis aries ENSOARG00000004647 I
ENSPANG00000009480 Papio anubis ENSPANG00000009480 I
Pvit_16613 Pogona vitticeps Pvit_16613 I
ENSPPYG00000014069 Pongo abelii ENSPPYG00000014069 I
Zfp385d Rattus norvegicus ENSRNOG00000014661 I
ZNF385D Sorex araneus ENSSARG00000006271 I
ZNF385D Sus scrofa ENSSSCG00000011208 I
ZNF385D Taeniopygia guttata ENSTGUG00000003279 I
ZNF385D Tupaia belangeri ENSTBEG00000008517 I