gene25394-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene25394-v1.0-hybrid T008432_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.801 0.881
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.787 0.871
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.786 0.891
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.755 0.782
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna25394.1-v1.0-hybrid AP2 164 213
mrna25394.1-v1.0-hybrid AP2 256 334

Links

Other AP2 family TFs
Other Fragaria vesca TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSGMOG00000016733 Gadus morhua ENSGMOG00000016733 N
ENSGALG00000029052 Gallus gallus ENSGALG00000029052 N
ENSMGAG00000006564 Meleagris gallopavo ENSMGAG00000006564 N
ENSPFOG00000013108 Poecilia formosa ENSPFOG00000013108 N
cers4a Takifugu rubripes ENSTRUG00000012847 N
cers3b Tetraodon nigroviridis ENSTNIG00000019226 N
ENSXMAG00000014591 Xiphophorus maculatus ENSXMAG00000014591 N