Gorai.006G107500 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.006G107500 T008561_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.692 0.745
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.692 0.745
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.683 0.745
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.683 0.745
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.683 0.745
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.683 0.725
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.677 0.706
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.677 0.706
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G107500.1 AP2 134 185

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI31512 Acyrthosiphon pisum ACYPI31512 I
ANCCEY_04739 Ancylostoma ceylanicum ANCCEY_04739 I
ANCDUO_13968 Ancylostoma duodenale ANCDUO_13968 I
ACAC_0000050701 Angiostrongylus cantonensis ACAC_0000050701 I
ACOC_0000924001 Angiostrongylus costaricensis ACOC_0000924001 I
AALB006664 Anopheles albimanus AALB006664 N
ACOM027979 Anopheles coluzzii ACOM027979 I
ADAC002899 Anopheles darlingi ADAC002899 N
AFAF001557 Anopheles farauti AFAF001557 I
AMAM009924 Anopheles maculatus AMAM009924 I
AMAM005266 Anopheles maculatus AMAM005266 N
ASU_06642 Ascaris suum ASU_06642 I
ACEP14857 Atta cephalotes ACEP14857 I
CBN18838 Caenorhabditis brenneri CBN18838 I
CBN09920 Caenorhabditis brenneri CBN09920 I
CBG03854 Caenorhabditis briggsae CBG03854 I
ztf-11 Caenorhabditis elegans WBGene00009939 D
CJA03417 Caenorhabditis japonica CJA03417 I
CRE08084 Caenorhabditis remanei CRE08084 I
CLEC010165 Cimex lectularius CLEC010165 N
CpipJ_CPIJ018573 Culex pipiens CpipJ_CPIJ018573 N
CPIJ018573 Culex quinquefasciatus CPIJ018573 N
YQE_11977 Dendroctonus ponderosae YQE_11977 I
DICVIV_01967 Dictyocaulus viviparus DICVIV_01967 I
nDi.2.2.2.g06992 Dirofilaria immitis nDi.2.2.2.g06992 I
CG43689 Drosophila melanogaster FBgn0263772 I
GI16394 Drosophila mojavensis FBgn0139142 I
GL14771 Drosophila persimilis FBgn0152375 I
ECANG7_03405 Echinococcus canadensis ECANG7_03405 N
EmuJ_000598400 Echinococcus multilocularis EmuJ_000598400 N
EVEC_0001307101 Enterobius vermicularis EVEC_0001307101 I
MYT1 Erinaceus europaeus ENSEEUG00000004157 N
HHAL001110-PA Halyomorpha halys HHAL001110-PA I
Hba_17025 Heterorhabditis bacteriophora Hba_17025 I
MYT1L Homo sapiens ENSG00000186487 I
TTAC_0000856801 Hydatigera taeniaeformis TTAC_0000856801 N
HDID_0000016901 Hymenolepis diminuta HDID_0000016901 N
ISCW018799 Ixodes scapularis ISCW018799 I
nLs.2.1.2.g09672 Litomosoides sigmodontis nLs.2.1.2.g09672 I
LCUP002242 Lucilia cuprina LCUP002242 I
Minc05804 Meloidogyne incognita Minc05804 I
MCOS_0000008701 Mesocestoides corti MCOS_0000008701 N
NECAME_10938 Necator americanus NECAME_10938 I
NBR_0001165301 Nippostrongylus brasiliensis NBR_0001165301 I
Ocbimv22028296m.g Octopus bimaculoides Ocbimv22028296m.g N
Ocbimv22028295m.g Octopus bimaculoides Ocbimv22028295m.g I
OESDEN_24201 Oesophagostomum dentatum OESDEN_24201 I
WBGene00238210 Onchocerca volvulus WBGene00238210 I
PTRK_0001788400 Parastrongyloides trichosuri PTRK_0001788400 I
RSKR_0000214800 Rhabditophanes kr3021 RSKR_0000214800 I
nRc.2.0.1.g21954 Romanomermis culicivorax nRc.2.0.1.g21954 N
SSLN_0001285301 Schistocephalus solidus SSLN_0001285301 N
SMU15028607 Schmidtea mediterranea SMU15028607 I
SMU15021651 Schmidtea mediterranea SMU15021651 N
L596_g1281 Steinernema carpocapsae L596_g1281 I
L889_g28085 Steinernema feltiae L889_g28085 I
L893_g1446 Steinernema glaseri L893_g1446 I
SPAL_0000892700 Strongyloides papillosus SPAL_0000892700 I
SSTP_0000574400 Strongyloides stercoralis SSTP_0000574400 I
SVE_1935100 Strongyloides venezuelensis SVE_1935100 I
SVE_1952800 Strongyloides venezuelensis SVE_1952800 I
SMUV_0000666101 Syphacia muris SMUV_0000666101 I
TASK_0000444001 Taenia asiatica TASK_0000444001 N
TELCIR_22038 Teladorsagia circumcincta TELCIR_22038 I
TELCIR_26151 Teladorsagia circumcincta TELCIR_26151 I