Pavir.J30447 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.J30447 T009630_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.723 0.940
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.709 0.900
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.690 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J30447.1.p AP2 33 84

Links

Other AP2 family TFs
Other Panicum virgatum TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007825 Ailuropoda melanoleuca ENSAMEG00000007825 N 0.000
ENSAPLG00000011121 Anas platyrhynchos ENSAPLG00000011121 N 0.000
L3MBTL3 Anolis carolinensis ENSACAG00000014140 N 0.000
ENSP00000354526-D1 Bos grunniens ENSP00000354526-D1 N 0.000
L3MBTL3 Bos taurus ENSBTAG00000017393 N 0.000
L3MBTL3 Callithrix jacchus ENSCJAG00000003235 N 0.000
L3MBTL3 Canis familiaris ENSCAFG00000001115 N 0.000
L3MBTL3 Cavia porcellus ENSCPOG00000006280 N 0.000
ENSCSAG00000016589 Chlorocebus sabaeus ENSCSAG00000016589 N 0.000
L3MBTL3 Choloepus hoffmanni ENSCHOG00000011296 N 0.000
L3MBTL3 Dasypus novemcinctus ENSDNOG00000019298 N 0.000
L3mbtl3 Dipodomys ordii ENSDORG00000013929 N 0.000
L3MBTL3 Equus caballus ENSECAG00000006343 N 0.000
L3MBTL3 Erinaceus europaeus ENSEEUG00000008805 N 0.000
L3MBTL3 Felis catus ENSFCAG00000001466 N 0.000
ENSFALG00000011622 Ficedula albicollis ENSFALG00000011622 N 0.000
ENSGALG00000014009 Gallus gallus ENSGALG00000014009 N 0.000
Gfo_R016211 Geospiza fortis Gfo_R016211 N 0.000
L3MBTL3 Gorilla gorilla ENSGGOG00000000549 N 0.000
L3MBTL3 Homo sapiens ENSG00000198945 N 0.000
ENSSTOG00000009978 Ictidomys tridecemlineatus ENSSTOG00000009978 N 0.000
ENSLACG00000022431 Latimeria chalumnae ENSLACG00000022431 N 0.000
L3MBTL3 Loxodonta africana ENSLAFG00000014675 N 0.000
ENSP00000357118 Macaca fascicularis ENSP00000357118 N 0.000
L3MBTL3 Macaca mulatta ENSMMUG00000021498 N 0.000
ENSMEUG00000014341 Macropus eugenii ENSMEUG00000014341 N 0.000
L3MBTL3 Meleagris gallopavo ENSMGAG00000013190 N 0.000
L3MBTL3 Microcebus murinus ENSMICG00000006114 N 0.000
L3MBTL3 Monodelphis domestica ENSMODG00000017623 N 0.000
Myotis_brandtii_L3MBTL3_10035664 Myotis brandtii Myotis_brandtii_L3MBTL3_10035664 N 0.000
L3MBTL3 Myotis lucifugus ENSMLUG00000012323 N 0.000
ENSNLEG00000026803 Nomascus leucogenys ENSNLEG00000026803 N 0.000
L3MBTL3 Ochotona princeps ENSOPRG00000003872 N 0.000
L3MBTL3 Oryctolagus cuniculus ENSOCUG00000016226 N 0.000
L3MBTL3 Otolemur garnettii ENSOGAG00000001632 N 0.000
ENSOARG00000013771 Ovis aries ENSOARG00000013771 N 0.000
L3MBTL3 Pan troglodytes ENSPTRG00000023858 N 0.000
ENSPANG00000010327 Papio anubis ENSPANG00000010327 N 0.000
Pvit_01718 Pogona vitticeps Pvit_01718 N 0.000
ENSPPYG00000017002 Pongo abelii ENSPPYG00000017002 N 0.000
ENSSHAG00000017557 Sarcophilus harrisii ENSSHAG00000017557 N 0.000
L3MBTL3 Sorex araneus ENSSARG00000012237 N 0.000
L3MBTL3 Sus scrofa ENSSSCG00000004203 N 0.000
L3MBTL3 Taeniopygia guttata ENSTGUG00000011709 N 0.000
ENSTSYG00000008001 Tarsius syrichta ENSTSYG00000008001 N 0.000
L3MBTL3 Tupaia belangeri ENSTBEG00000013158 N 0.000
L3MBTL3 Tursiops truncatus ENSTTRG00000010125 N 0.000
L3MBTL3 Vicugna pacos ENSVPAG00000002988 N 0.000