CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J32829
(
Panicum virgatum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Pavir.J32829
T009634_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J32829.1.p
AP2
5
58
PVFRGVRRRGRAGRWVCEVRVPGSRGDRLWVGTFDTAEAAARAHDAAMLALCGA
Links
Other
AP2
family TFs
Other
Panicum virgatum
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
gene12133-v1.0-hybrid
Fragaria vesca
gene12133-v1.0-hybrid
N
0.000
gene12168-v1.0-hybrid
Fragaria vesca
gene12168-v1.0-hybrid
N
0.000
LPERR04G21110
Leersia perrieri
LPERR04G21110
N
0.000
OBART09G15000
Oryza barthii
OBART09G15000
N
0.000
ORGLA09G0115600
Oryza glaberrima
ORGLA09G0115600
N
0.000
OGLUM09G15640
Oryza glumaepatula
OGLUM09G15640
N
0.000
BGIOSGA029518
Oryza indica
BGIOSGA029518
N
0.000
OMERI09G11680
Oryza meridionalis
OMERI09G11680
N
0.000
ONIVA09G15620
Oryza nivara
ONIVA09G15620
N
0.000
OPUNC09G13450
Oryza punctata
OPUNC09G13450
N
0.000
ORUFI09G16180
Oryza rufipogon
ORUFI09G16180
N
0.000
OS09G0493700
Oryza sativa
OS09G0493700
N
0.000