Thhalv10010513m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10010513m.g T009921_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMZ
M08402_2.00 		Arabidopsis thaliana
YCTCGTAC
GTACGAGR		 ChIP-chip
Mathelier et al.(2014)
MA0553.1 		0.869 1.000
TOE2
M00851_2.00 		Arabidopsis thaliana
NNNNTACGAGGWN
NWCCTCGTANNNN		 PBM
Franco-Zorrilla et al.(2014)
TOE2 		0.855 0.959
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10010513m AP2 119 169

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSNLEG00000004771 Nomascus leucogenys ENSNLEG00000004771 N
Tal_R005235 Tyto alba Tal_R005235 N