CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARID5A
(
Sorex araneus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
ENSSARG00000003004
T014764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN
NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.288
1.000
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN
NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.288
1.000
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000002703
ARID/BRIGHT
49
100
EEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELXXXX
Links
Other
ARID/BRIGHT
family TFs
Other
Sorex araneus
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g00338
Acanthocheilonema viteae
nAv.1.0.1.g00338
N
ANCCAN_09492
Ancylostoma caninum
ANCCAN_09492
N
ANCCEY_03110
Ancylostoma ceylanicum
ANCCEY_03110
N
ANCDUO_04788
Ancylostoma duodenale
ANCDUO_04788
N
AFAF010393
Anopheles farauti
AFAF010393
N
AFUN009891
Anopheles funestus
AFUN009891
N
AMEM013442
Anopheles merus
AMEM013442
N
ASTEI11512
Anopheles stephensi
ASTEI11512
N
GB44899
Apis mellifera
GB44899
N
ACEP26642
Atta cephalotes
ACEP26642
N
BGIBMGA010273
Bombyx mori
BGIBMGA010273
N
Bm1891
Brugia malayi
Bm1891
N
BTMF_0001195401
Brugia timori
BTMF_0001195401
N
BXY_0663500
Bursaphelenchus xylophilus
BXY_0663500
N
CBN07938
Caenorhabditis brenneri
CBN07938
N
CBG12337
Caenorhabditis briggsae
CBG12337
N
let-526
Caenorhabditis elegans
WBGene00002717
N
CJA11729
Caenorhabditis japonica
CJA11729
N
CRE29533
Caenorhabditis remanei
CRE29533
N
Cflo_01219--XP_395512.3_APIME
Camponotus floridanus
Cflo_01219--XP_395512.3_APIME
N
KGM_12579
Danaus plexippus
KGM_12579
N
YQE_09239
Dendroctonus ponderosae
YQE_09239
N
nDi.2.2.2.g04479
Dirofilaria immitis
nDi.2.2.2.g04479
N
DME_0001005001
Dracunculus medinensis
DME_0001005001
N
GF23141
Drosophila ananassae
FBgn0100135
N
GG16758
Drosophila erecta
FBgn0108988
N
GH15872
Drosophila grimshawi
FBgn0123343
N
osa
Drosophila melanogaster
FBgn0261885
N
GI23637
Drosophila mojavensis
FBgn0146363
N
GA26236
Drosophila pseudoobscura
FBgn0247610
N
GM15347
Drosophila sechellia
FBgn0170267
N
GJ24712
Drosophila virilis
FBgn0211788
N
GK22507
Drosophila willistoni
FBgn0224484
N
osa
Drosophila yakuba
FBgn0041640
N
EEL_0001008901
Elaeophora elaphi
EEL_0001008901
N
EVEC_0000024601
Enterobius vermicularis
EVEC_0000024601
N
GPLIN_000077900
Globodera pallida
GPLIN_000077900
N
GPUH_0000112301
Gongylonema pulchrum
GPUH_0000112301
N
HCOI00324200
Haemonchus contortus
HCOI00324200
N
HPLM_0000291901
Haemonchus placei
HPLM_0000291901
N
Hsal_01939--XP_395512.3_APIME
Harpegnathos saltator
Hsal_01939--XP_395512.3_APIME
N
HPBE_0000983501
Heligmosomoides bakeri
HPBE_0000983501
N
ISCW014189
Ixodes scapularis
ISCW014189
I
LDEC011073
Leptinotarsa decemlineata
LDEC011073
I
nLs.2.1.2.g09434
Litomosoides sigmodontis
nLs.2.1.2.g09434
N
LOAG_17326
Loa loa
LOAG_17326
N
LCUP015823
Lucilia cuprina
LCUP015823
N
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0
I
MhA1_Contig163.frz3.gene26
Meloidogyne hapla
MhA1_Contig163.frz3.gene26
I
NECAME_01002
Necator americanus
NECAME_01002
N
NBR_0002081701
Nippostrongylus brasiliensis
NBR_0002081701
N
OESDEN_04600
Oesophagostomum dentatum
OESDEN_04600
N
OFLC_0001383401
Onchocerca flexuosa
OFLC_0001383401
N
nOo.2.0.1.g08403
Onchocerca ochengi
nOo.2.0.1.g08403
N
WBGene00237224
Onchocerca volvulus
WBGene00237224
N
PTRK_0001699800
Parastrongyloides trichosuri
PTRK_0001699800
N
PHUM080380
Pediculus humanus
PHUM080380
N
PPAI002183
Phlebotomus papatasi
PPAI002183
N
scaffold2015-EXSNAP2012.2
Pristionchus exspectatus
scaffold2015-EXSNAP2012.2
N
PPA05721
Pristionchus pacificus
PPA05721
N
RSKR_0000271300
Rhabditophanes kr3021
RSKR_0000271300
N
SMU15038692
Schmidtea mediterranea
SMU15038692
N
SBAD_0000668001
Soboliphyme baturini
SBAD_0000668001
N
SINV22763
Solenopsis invicta
SINV22763
N
L596_g4117
Steinernema carpocapsae
L596_g4117
N
L889_g180
Steinernema feltiae
L889_g180
N
L893_g29191
Steinernema glaseri
L893_g29191
N
L898_g7337
Steinernema monticolum
L898_g7337
N
L892_g19705
Steinernema scapterisci
L892_g19705
N
SMAR006121
Strigamia maritima
SMAR006121
I
SPAL_0001124500
Strongyloides papillosus
SPAL_0001124500
N
SSTP_0000977600
Strongyloides stercoralis
SSTP_0000977600
N
SVE_1830100
Strongyloides venezuelensis
SVE_1830100
N
TELCIR_03263
Teladorsagia circumcincta
TELCIR_03263
N
TCLT_0000619901
Thelazia callipaeda
TCLT_0000619901
N
TCNE_0000128301
Toxocara canis
TCNE_0000128301
N
TC013586
Tribolium castaneum
TC013586
N
D917_06367
Trichinella nativa
D917_06367
N
EFV52694
Trichinella spiralis
EFV52694
N
WUBG_00477
Wuchereria bancrofti
WUBG_00477
N