CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PGSC0003DMG400028852
(
Solanum tuberosum
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
PGSC0003DMG400028852
T015424_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400074246
ARID/BRIGHT
594
692
SEEEFLKDVMQFLILRGHTRLIPQGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNRMTGVGNTLKRHYETYLLEYE
PGSC0003DMT400074247
ARID/BRIGHT
404
502
SEEEFLKDVMQFLILRGHTRLIPQGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNRMTGVGNTLKRHYETYLLEYE
Links
Other
ARID/BRIGHT
family TFs
Other
Solanum tuberosum
TFs
109 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSBTAP00000021794-D1
Bos grunniens
ENSBTAP00000021794-D1
N
0.000
ZFP28
Bos taurus
ENSBTAG00000002055
N
0.000
ZFP28
Canis familiaris
ENSCAFG00000024289
I
0.000
ENSCSAG00000001666
Chlorocebus sabaeus
ENSCSAG00000001666
I
0.000
ZFP28
Dasypus novemcinctus
ENSDNOG00000007010
I
0.000
ZFP28
Echinops telfairi
ENSETEG00000002303
I
0.000
ZFP28
Equus caballus
ENSECAG00000013849
I
0.000
ZFP28
Gorilla gorilla
ENSGGOG00000011352
I
0.000
ZFP28
Homo sapiens
ENSG00000196867
D
0.000
ENSSTOG00000022134
Ictidomys tridecemlineatus
ENSSTOG00000022134
I
0.000
ZFP28
Loxodonta africana
ENSLAFG00000010041
I
0.000
ENSP00000301318
Macaca fascicularis
ENSP00000301318
I
0.000
ZFP28
Macaca mulatta
ENSMMUG00000021673
I
0.000
ENSMPUG00000006646
Mustela putorius furo
ENSMPUG00000006646
I
0.000
Zfp28
Mus musculus
ENSMUSG00000062861
N
0.000
ENSNLEG00000010865
Nomascus leucogenys
ENSNLEG00000010865
I
0.000
ZFP28
Ochotona princeps
ENSOPRG00000014306
I
0.000
ZFP28
Otolemur garnettii
ENSOGAG00000004896
I
0.000
ZFP28
Pan troglodytes
ENSPTRG00000023421
I
0.000
ENSPANG00000008416
Papio anubis
ENSPANG00000008416
I
0.000
ENSPPYG00000010451
Pongo abelii
ENSPPYG00000010451
I
0.000
Zfp28
Rattus norvegicus
ENSRNOG00000042777
I
0.000
ZFP28
Sus scrofa
ENSSSCG00000027774
I
0.000