CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_chr_41111
(
Mycosphaerella graminicola
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
estExt_Genewise1Plus.C_chr_41111
T015989_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_chr_41111
ARID/BRIGHT
14
105
ERDEFIRKLKEYHEKRGTNLDLEPKIGIRHIDIHKLYERVVEEGGYDLVSDTKAKPLMWRKLAEEFIGKNQYTAAQAFQIKNVYYKNLCAYE
Links
Other
ARID/BRIGHT
family TFs
Other
Mycosphaerella graminicola
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG801016
Hyaloperonospora arabidopsidis
HpaG801016
I
0.000
HpaG811872
Hyaloperonospora arabidopsidis
HpaG811872
I
0.000
PITG_00513
Phytophthora infestans
PITG_00513
I
0.000
fgenesh_scip_prom.46568.5993
Phytophthora kernoviae
fgenesh_scip_prom.46568.5993
I
0.000
fgenesh_scip_prom.28083.3668
Phytophthora lateralis
fgenesh_scip_prom.28083.3668
I
0.000
fgenesh_scip_prom.28083.4862
Phytophthora lateralis
fgenesh_scip_prom.28083.4862
N
0.000
F443_04247
Phytophthora parasitica
F443_04247
I
0.000
Phyra72796
Phytophthora ramorum
Phyra72796
D
0.000
Phyra80899
Phytophthora ramorum
Phyra80899
N
0.000
Physo142771
Phytophthora sojae
Physo142771
N
0.000
Physo142552
Phytophthora sojae
Physo142552
I
0.000
maker-pag1_scaffold_490-fgenesh-gene-0.0
Pythium aphanidermatum
maker-pag1_scaffold_490-fgenesh-gene-0.0
N
0.000
maker-pag1_scaffold_4-fgenesh-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_4-fgenesh-gene-0.4
I
0.000
maker-pag1_scaffold_178-snap-gene-0.14
Pythium aphanidermatum
maker-pag1_scaffold_178-snap-gene-0.14
N
0.000
maker-pag1_scaffold_178-fgenesh-gene-0.2
Pythium aphanidermatum
maker-pag1_scaffold_178-fgenesh-gene-0.2
N
0.000
maker-par_contig_5774-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_5774-fgenesh-gene-0.0
I
0.000
maker-par_contig_5863-snap-gene-0.1
Pythium arrhenomanes
maker-par_contig_5863-snap-gene-0.1
N
0.000
maker-par_contig_6289-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_6289-fgenesh-gene-0.0
N
0.000
maker-pir_contig_2120-snap-gene-0.3
Pythium irregulare
maker-pir_contig_2120-snap-gene-0.3
N
0.000
maker-pir_contig_210-snap-gene-0.17
Pythium irregulare
maker-pir_contig_210-snap-gene-0.17
N
0.000
maker-pir_contig_1401-snap-gene-0.1
Pythium irregulare
maker-pir_contig_1401-snap-gene-0.1
I
0.000
maker-pir_contig_1091-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_1091-fgenesh-gene-0.1
N
0.000
maker-piw_contig_3463-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_3463-fgenesh-gene-0.0
N
0.000
maker-piw_contig_3553-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_3553-fgenesh-gene-0.0
N
0.000
maker-piw_contig_2979-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_2979-fgenesh-gene-0.0
I
0.000
PYU1_G004134
Pythium ultimum
PYU1_G004134
I
0.000
PYU1_G006427
Pythium ultimum
PYU1_G006427
N
0.000
PYU1_G006442
Pythium ultimum
PYU1_G006442
N
0.000
PYU1_G006446
Pythium ultimum
PYU1_G006446
N
0.000
PYU1_G006450
Pythium ultimum
PYU1_G006450
N
0.000
PYU1_G014993
Pythium ultimum
PYU1_G014993
N
0.000
PYU1_G014994
Pythium ultimum
PYU1_G014994
N
0.000
maker-pve_contig_182-snap-gene-0.15
Pythium vexans
maker-pve_contig_182-snap-gene-0.15
I
0.000
maker-pve_contig_695-fgenesh-gene-0.3
Pythium vexans
maker-pve_contig_695-fgenesh-gene-0.3
I
0.000
SPRG_02380
Saprolegnia parasitica
SPRG_02380
N
0.000