CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-piw_contig_2979-fgenesh-gene-0.0
(
Pythium iwayamai
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
maker-piw_contig_2979-fgenesh-gene-0.0
T274186_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Phyra72796
M02331_2.00
Phytophthora ramorum
NHAYCYNNN
NNNRGRTDN
PBM
Weirauch et al.(2014)
pTH7803
0.714
0.787
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPW00000024764
Myb
27
73
QGLWSEEEHDRFLEAMKRFPKGPWKDITAHVATRSVRQVQTHAQKYC
Links
Other
Myb/SANT
family TFs
Other
Pythium iwayamai
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pir_contig_1153-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1153-fgenesh-gene-0.2
I
0.758
maker-par_contig_5774-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_5774-fgenesh-gene-0.0
I
0.724
F443_04247
Phytophthora parasitica
F443_04247
I
0.714
fgenesh_scip_prom.46568.5993
Phytophthora kernoviae
fgenesh_scip_prom.46568.5993
I
0.714
maker-pir_contig_1401-snap-gene-0.1
Pythium irregulare
maker-pir_contig_1401-snap-gene-0.1
I
0.714
maker-pve_contig_182-snap-gene-0.15
Pythium vexans
maker-pve_contig_182-snap-gene-0.15
I
0.714
Phyra72796
Phytophthora ramorum
Phyra72796
D
0.714
Physo142552
Phytophthora sojae
Physo142552
I
0.714
PITG_00513
Phytophthora infestans
PITG_00513
I
0.714
PYU1_G004134
Pythium ultimum
PYU1_G004134
I
0.714
maker-pag1_scaffold_4-fgenesh-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_4-fgenesh-gene-0.4
I
0.684
fgenesh_masked-pir_contig_2420-abinit-gene-0.2
Pythium irregulare
fgenesh_masked-pir_contig_2420-abinit-gene-0.2
N
0.683
fgenesh_scip_prom.28083.3668
Phytophthora lateralis
fgenesh_scip_prom.28083.3668
I
0.675
F443_20633
Phytophthora parasitica
F443_20633
I
0.665
fgenesh_scip_prom.46568.10732
Phytophthora kernoviae
fgenesh_scip_prom.46568.10732
I
0.665
Physo132994
Phytophthora sojae
Physo132994
I
0.665
PITG_14364
Phytophthora infestans
PITG_14364
I
0.665
e_gw1.4.390.1
Phytophthora capsici
e_gw1.4.390.1
I
0.665