Thhalv10022553m.g (Eutrema salsugineum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Thhalv10022553m.g T016190_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.747 0.941
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.591 0.729
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10022553m ARID/BRIGHT 542 627
Thhalv10022554m ARID/BRIGHT 542 627

Links

Other ARID/BRIGHT family TFs
Other Eutrema salsugineum TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PXEA_0001659601 Protopolystoma xenopodis PXEA_0001659601 N
SCUD_0000559501 Schistosoma curassoni SCUD_0000559501 N
A_00348 Schistosoma haematobium A_00348 N
Sjc_0011400 Schistosoma japonicum Sjc_0011400 N
Smp_156290 Schistosoma mansoni Smp_156290 N
SMTD_0000266501 Schistosoma mattheei SMTD_0000266501 N
SROB_0002139201 Schistosoma rodhaini SROB_0002139201 N
SPER_0002792401 Spirometra erinaceieuropaei SPER_0002792401 N