AT5G60130 (Arabidopsis thaliana)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 AT5G60130 T018483_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G60130
M06712_2.00		 Arabidopsis thaliana
WTTTBCTTNDNWTTTBCTT
AAGVAAAWNHNAAGVAAAW		 Dap-seq
OMalley et al.(2016)
AT5G60130_col_a		 (Direct) (Direct)
AT5G60130
M06713_2.00		 Arabidopsis thaliana
DTTTTSCTTAWNTTTTGCTTA
TAAGCAAAANWTAAGSAAAAH		 Dap-seq
OMalley et al.(2016)
AT5G60130_colamp_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT5G60130.1 B3 1 85
AT5G60130.1 B3 202 296
AT5G60130.2 B3 14 111
AT5G60130.2 B3 202 296
AT5G60130.3 B3 1 85
AT5G60130.3 B3 202 296
AT5G60130.4 B3 11 108
AT5G60130.4 B3 225 319
AT5G60130.5 B3 14 111

Links

Other B3 family TFs
Other Arabidopsis thaliana TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
REM1 Arabidopsis lyrata fgenesh2_kg.7__1010__AT4G31610.1 I
REM1 Arabidopsis thaliana AT4G31610 D
Bostr.7867s1015 Boechera stricta Bostr.7867s1015 I
Cagra.3807s0032 Capsella grandiflora Cagra.3807s0032 I
Carubv10006696m.g Capsella rubella Carubv10006696m.g I