CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_scaffold_1001418
(
Arabidopsis lyrata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
fgenesh1_pm.C_scaffold_1001418
T019180_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_scaffold_1001418
B3
9
100
FFKPFISQKSSKSLAIPLGFEEHFPAPLPITVDLLDYNGRSWTVRVKKRGENVFLTLGWENFVKDNNLEDGKHLNFIYDRQRTFYVIIFGHN
Links
Other
B3
family TFs
Other
Arabidopsis lyrata
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G16640
Arabidopsis thaliana
AT1G16640
N
0.848
Bostr.7128s0269
Boechera stricta
Bostr.7128s0269
N
0.815
Bo5g022070
Brassica oleracea
Bo5g022070
N
0.717
Cagra.0824s0035
Capsella grandiflora
Cagra.0824s0035
N
0.815
Thhalv10009082m.g
Eutrema salsugineum
Thhalv10009082m.g
N
0.739