CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0824s0035
(
Capsella grandiflora
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cagra.0824s0035
T022731_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0824s0035.1.p
B3
10
101
FMKVFISQKSSKSFAIPLGFNEYFPDPLPITVDLLDYSGRSWTVRMKKIGENVFLTLGWENFVKDNNLEDGKYLNFIYDCDRTFYVIIFGHD
Links
Other
B3
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.7128s0269
Boechera stricta
Bostr.7128s0269
N
0.946
Carubv10012547m.g
Capsella rubella
Carubv10012547m.g
N
0.837
AT1G16640
Arabidopsis thaliana
AT1G16640
N
0.815
fgenesh1_pm.C_scaffold_1001418
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001418
N
0.815
Bra026034
Brassica rapa
Bra026034
N
0.809
Bo5g022070
Brassica oleracea
Bo5g022070
N
0.793
Thhalv10009082m.g
Eutrema salsugineum
Thhalv10009082m.g
N
0.717