CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART07G05360
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART07G05360
T020013_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART07G05360.1
B3
116
215
FVKTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKAVQPLIVKDLQGSPMTFDYGRNGNRVTLAKVWKKFRDDMDFVDGDNVIFMRRRDDDELYVGVRRQR
OBART07G05360.1
B3
491
590
FVKPLTCTDAVKNRYRFIVPKREAAMGVLPQLQLNEHVPLYIKDMHGKEWVINYTWKEYTHMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRT
OBART07G05360.1
B3
841
923
FDGATFLSKPWLALPCDGPMPLIVKDLQGSPMTFDYGRNGNRVTLAKVWKKFRDDMDFVDGDNVIFMRRRDDDELYVGVRRQR
OBART07G05360.1
B3
1188
1287
FVKPLTCTDAVKNRYRFIVPKREAAMGVLPQLQLNEHVPLYIKDMHGKEWVINYTWKEYTHMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRT
OBART07G05360.3
B3
118
221
FVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKAVQPLLVKDLHGSPMTFDYGRKSKRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRSQR
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANAC004
Arabidopsis lyrata
Al_scaffold_0001_137
I
anac005
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000123
I
NAC004
Arabidopsis thaliana
AT1G02230
D
NAC005
Arabidopsis thaliana
AT1G02250
D
Bostr.5325s0016
Boechera stricta
Bostr.5325s0016
I
Bostr.8819s0187
Boechera stricta
Bostr.8819s0187
I
Bo5g002910
Brassica oleracea
Bo5g002910
I
Bo5g002950
Brassica oleracea
Bo5g002950
I
Bo8g117560
Brassica oleracea
Bo8g117560
I
Bra033300
Brassica rapa
Bra033300
I
Bra033303
Brassica rapa
Bra033303
I
Bra033306
Brassica rapa
Bra033306
I
Bra033308
Brassica rapa
Bra033308
I