CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM03G27140
(
Oryza glumaepatula
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OGLUM03G27140
T020072_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM03G27140.1
B3
120
210
FHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSD
OGLUM03G27140.1
B3
339
440
FVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRET
OGLUM03G27140.1
B3
507
607
YVSIMNKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICLFELMNDESKLTMTVHIIRRN
OGLUM03G27140.1
B3
675
765
FHRQMSANFEHSMIIPNKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLLFCHIENSRFAVLILDSD
OGLUM03G27140.1
B3
879
980
YVTTMKHSNVNSHYASLVIAKHYACAYFPRTSQTITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVRHNHVKEGDVCIFHLKNFNGRKFRATVHLLRET
OGLUM03G27140.1
B3
1090
1191
YVSIMNKSNVGTDGLYIITLGRQFATRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRDNRLQTEDICLFQLMKNSERGLAMTVHIIRHS
OGLUM03G27140.2
B3
120
210
FHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSD
OGLUM03G27140.2
B3
339
440
FVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRET
OGLUM03G27140.2
B3
507
602
YVSIMNKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICLFELMNDERASLGLGK
OGLUM03G27140.2
B3
657
747
FHRQMSANFEHSMIIPNKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLLFCHIENSRFAVLILDSD
OGLUM03G27140.2
B3
861
962
YVTTMKHSNVNSHYASLVIAKHYACAYFPRTSQTITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVRHNHVKEGDVCIFHLKNFNGRKFRATVHLLRET
OGLUM03G27140.2
B3
1072
1173
YVSIMNKSNVGTDGLYIITLGRQFATRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRDNRLQTEDICLFQLMKNSERGLAMTVHIIRHS
Links
Other
B3
family TFs
Other
Oryza glumaepatula
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm7011
Brugia malayi
Bm7011
N
BTMF_0000164501
Brugia timori
BTMF_0000164501
N
nDi.2.2.2.g05361
Dirofilaria immitis
nDi.2.2.2.g05361
N
nLs.2.1.2.g04721
Litomosoides sigmodontis
nLs.2.1.2.g04721
N
LOAG_00639
Loa loa
LOAG_00639
N
nOo.2.0.1.g00936
Onchocerca ochengi
nOo.2.0.1.g00936
N
WBGene00244610
Onchocerca volvulus
WBGene00244610
N
TCLT_0000751501
Thelazia callipaeda
TCLT_0000751501
N
TCNE_0001472701
Toxocara canis
TCNE_0001472701
N