CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM03G27140
(
Oryza glumaepatula
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OGLUM03G27140
T020072_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM03G27140.1
B3
120
210
FHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSD
OGLUM03G27140.1
B3
339
440
FVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRET
OGLUM03G27140.1
B3
507
607
YVSIMNKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICLFELMNDESKLTMTVHIIRRN
OGLUM03G27140.1
B3
675
765
FHRQMSANFEHSMIIPNKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLLFCHIENSRFAVLILDSD
OGLUM03G27140.1
B3
879
980
YVTTMKHSNVNSHYASLVIAKHYACAYFPRTSQTITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVRHNHVKEGDVCIFHLKNFNGRKFRATVHLLRET
OGLUM03G27140.1
B3
1090
1191
YVSIMNKSNVGTDGLYIITLGRQFATRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRDNRLQTEDICLFQLMKNSERGLAMTVHIIRHS
OGLUM03G27140.2
B3
120
210
FHLQMSANFGHSMTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTILQCGWEAFVDAHHIEENDSLLFRHIENSRFEVLILDSD
OGLUM03G27140.2
B3
339
440
FVAIMKHSNVNSRRACLVIPKRYASAHFPLESQTITLQRQGKNKKWYPMFYIRKDGSGYMLYGCWKNFVRDNHVKEGDMCIFHLTKFTGGEFGATVHLLRET
OGLUM03G27140.2
B3
507
602
YVSIMNKSNVGTDGLYIIIFGRQFATRYLPEGEQTLTLLMTGKSNAWQVKMRPRSGDAQMITTGWRHFVHDNHLQIEDICLFELMNDERASLGLGK
OGLUM03G27140.2
B3
657
747
FHRQMSANFEHSMIIPNKFLDQFGGKISRTVELESPKGNVYVVKVSKHMNKTVLQCGWEAFVDAHQIEENDSLLFCHIENSRFAVLILDSD
OGLUM03G27140.2
B3
861
962
YVTTMKHSNVNSHYASLVIAKHYACAYFPRTSQTITLKWHGKNRKWHPKFYIRKDQVGYILHGRWIDFVRHNHVKEGDVCIFHLKNFNGRKFRATVHLLRET
OGLUM03G27140.2
B3
1072
1173
YVSIMNKSNVGTDGLYIITLGRQFATRYLPEGEQTLTLLTTGTGKAWQVKMRPRSGDARMFTLGWRDFVRDNRLQTEDICLFQLMKNSERGLAMTVHIIRHS
Links
Other
B3
family TFs
Other
Oryza glumaepatula
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI03G27200
Oryza rufipogon
ORUFI03G27200
N
0.958
ONIVA03G27270
Oryza nivara
ONIVA03G27270
N
0.943