CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_022274
(
Oryza longistaminata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OLONG_022274
T020183_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_022274-R1
B3
29
119
FLRRMAADSMHSMIMPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHNIQEGESLLFRHIENSRYEVLILDSD
OLONG_022274-R1
B3
230
330
FVAVMKKCNLQSPAPYLVISSRYASVHFPCETATITLQRPSKRKKWYPRFYKIIDKSDHMLRGQWQNFVHDNCLQEEDICLFVPTKGGRNFTFTVHLLRAE
OLONG_022274-R1
B3
438
530
KGKFRGLELSSRYAASYLPDKNHQTLVLQCKGMIWQINLVVRRRYRKGKRWFLTAGWRKFAHDNRLRVGDFCLFELKKKKKKKLTMEVHIISN
OLONG_022274-R1
B3
562
653
CFLIRMTADSMHSMIIPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLLFRHIENSCFEVMILDSD
OLONG_022274-R1
B3
795
885
IGLTSSPCQLELGARYAAAVHLPDRRQTVVLQRMGQRWDTVMQTKSGRCTTRRFLINGWSRFVRDNRLGVGDICLLELKKHDSKLTMTQNT
OLONG_022274-R2
B3
29
119
FVRRMTADSRRSMIIPCKFVNHFGGDFSGTIKLQSPNGVLHVVEVTECKNKTVLRCGWEAFVDAHHIEENDSLLFRRVENSRFEVLIFDSD
OLONG_022274-R2
B3
208
310
VFVAIMRKSNVQLPTPFLVISFCYAEVHFPHKSVTVTLQRPCKSKKWHPRFYKRRDARMNILRGSWVEFVKDNRVQEQDICVFVPTKDARRNFTFTVHLLRVA
OLONG_022274-R2
B3
390
488
KKIVEEKVRSIQSKFPVYVAIMKKSNVERNRRQTVVLQRRGERWATVMQIRSGTRRLLISGWHRFVRDNRLRVGDICLFEFKTHERWRLTMAVHAIFRE
OLONG_022274-R2
B3
516
606
FLRRMAADSMHSMIMPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHNIQEGESLLFRHIENSRYEVLILDSD
OLONG_022274-R2
B3
717
817
FVAVMKKCNLQSPAPYLVISSRYASVHFPCETATITLQRPSKRKKWYPRFYKIIDKSDHMLRGQWQNFVHDNCLQEEDICLFVPTKGGRNFTFTVHLLRAE
OLONG_022274-R2
B3
925
1017
KGKFRGLELSSRYAASYLPDKNHQTLVLQCKGMIWQINLVVRRRYRKGKRWFLTAGWRKFAHDNRLRVGDFCLFELKKKKKKKLTMEVHIISN
OLONG_022274-R2
B3
1049
1140
CFLIRMTADSMHSMIIPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLLFRHIENSCFEVMILDSD
OLONG_022274-R2
B3
1283
1372
GLTSSPCQLELGARYAAAVHLPDRRQTVVLQRMGQRWDTVMQTKSGRCTTRRFLINGWSRFVRDNRLGVGDICLLELKKHDSKLTMTQNT
OLONG_022274-R3
B3
29
119
FVRRMTADSRRSMIIPCKFVNHFGGDFSGTIKLQSPNGVLHVVEVTECKNKTVLRCGWEAFVDAHHIEENDSLLFRRVENSRFEVLIFDSD
OLONG_022274-R3
B3
208
310
VFVAIMRKSNVQLPTPFLVISFCYAEVHFPHKSVTVTLQRPCKSKKWHPRFYKRRDARMNILRGSWVEFVKDNRVQEQDICVFVPTKDARRNFTFTVHLLRVA
OLONG_022274-R3
B3
390
488
KKIVEEKVRSIQSKFPVYVAIMKKSNVERNRRQTVVLQRRGERWATVMQIRSGTRRLLISGWHRFVRDNRLRVGDICLFEFKTHERWRLTMAVHAIFRE
Links
Other
B3
family TFs
Other
Oryza longistaminata
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMAR000164
Strigamia maritima
SMAR000164
N
SMAR000290
Strigamia maritima
SMAR000290
N
SMAR000430
Strigamia maritima
SMAR000430
N
SMAR000499
Strigamia maritima
SMAR000499
N
SMAR001236
Strigamia maritima
SMAR001236
N
SMAR001729
Strigamia maritima
SMAR001729
N
SMAR001843
Strigamia maritima
SMAR001843
N
SMAR002013
Strigamia maritima
SMAR002013
N
SMAR003133
Strigamia maritima
SMAR003133
N
SMAR006219
Strigamia maritima
SMAR006219
N
SMAR006326
Strigamia maritima
SMAR006326
N
SMAR007256
Strigamia maritima
SMAR007256
N
SMAR011749
Strigamia maritima
SMAR011749
N
SMAR012386
Strigamia maritima
SMAR012386
N
SMAR012441
Strigamia maritima
SMAR012441
N