CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_022274
(
Oryza longistaminata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OLONG_022274
T020183_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_022274-R1
B3
29
119
FLRRMAADSMHSMIMPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHNIQEGESLLFRHIENSRYEVLILDSD
OLONG_022274-R1
B3
230
330
FVAVMKKCNLQSPAPYLVISSRYASVHFPCETATITLQRPSKRKKWYPRFYKIIDKSDHMLRGQWQNFVHDNCLQEEDICLFVPTKGGRNFTFTVHLLRAE
OLONG_022274-R1
B3
438
530
KGKFRGLELSSRYAASYLPDKNHQTLVLQCKGMIWQINLVVRRRYRKGKRWFLTAGWRKFAHDNRLRVGDFCLFELKKKKKKKLTMEVHIISN
OLONG_022274-R1
B3
562
653
CFLIRMTADSMHSMIIPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLLFRHIENSCFEVMILDSD
OLONG_022274-R1
B3
795
885
IGLTSSPCQLELGARYAAAVHLPDRRQTVVLQRMGQRWDTVMQTKSGRCTTRRFLINGWSRFVRDNRLGVGDICLLELKKHDSKLTMTQNT
OLONG_022274-R2
B3
29
119
FVRRMTADSRRSMIIPCKFVNHFGGDFSGTIKLQSPNGVLHVVEVTECKNKTVLRCGWEAFVDAHHIEENDSLLFRRVENSRFEVLIFDSD
OLONG_022274-R2
B3
208
310
VFVAIMRKSNVQLPTPFLVISFCYAEVHFPHKSVTVTLQRPCKSKKWHPRFYKRRDARMNILRGSWVEFVKDNRVQEQDICVFVPTKDARRNFTFTVHLLRVA
OLONG_022274-R2
B3
390
488
KKIVEEKVRSIQSKFPVYVAIMKKSNVERNRRQTVVLQRRGERWATVMQIRSGTRRLLISGWHRFVRDNRLRVGDICLFEFKTHERWRLTMAVHAIFRE
OLONG_022274-R2
B3
516
606
FLRRMAADSMHSMIMPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHNIQEGESLLFRHIENSRYEVLILDSD
OLONG_022274-R2
B3
717
817
FVAVMKKCNLQSPAPYLVISSRYASVHFPCETATITLQRPSKRKKWYPRFYKIIDKSDHMLRGQWQNFVHDNCLQEEDICLFVPTKGGRNFTFTVHLLRAE
OLONG_022274-R2
B3
925
1017
KGKFRGLELSSRYAASYLPDKNHQTLVLQCKGMIWQINLVVRRRYRKGKRWFLTAGWRKFAHDNRLRVGDFCLFELKKKKKKKLTMEVHIISN
OLONG_022274-R2
B3
1049
1140
CFLIRMTADSMHSMIIPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLLFRHIENSCFEVMILDSD
OLONG_022274-R2
B3
1283
1372
GLTSSPCQLELGARYAAAVHLPDRRQTVVLQRMGQRWDTVMQTKSGRCTTRRFLINGWSRFVRDNRLGVGDICLLELKKHDSKLTMTQNT
OLONG_022274-R3
B3
29
119
FVRRMTADSRRSMIIPCKFVNHFGGDFSGTIKLQSPNGVLHVVEVTECKNKTVLRCGWEAFVDAHHIEENDSLLFRRVENSRFEVLIFDSD
OLONG_022274-R3
B3
208
310
VFVAIMRKSNVQLPTPFLVISFCYAEVHFPHKSVTVTLQRPCKSKKWHPRFYKRRDARMNILRGSWVEFVKDNRVQEQDICVFVPTKDARRNFTFTVHLLRVA
OLONG_022274-R3
B3
390
488
KKIVEEKVRSIQSKFPVYVAIMKKSNVERNRRQTVVLQRRGERWATVMQIRSGTRRLLISGWHRFVRDNRLRVGDICLFEFKTHERWRLTMAVHAIFRE
Links
Other
B3
family TFs
Other
Oryza longistaminata
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI03G27190
Oryza rufipogon
ORUFI03G27190
N
0.965
ONIVA03G27260
Oryza nivara
ONIVA03G27260
N
0.929
OGLUM03G27130
Oryza glumaepatula
OGLUM03G27130
N
0.923
OBART03G26230
Oryza barthii
OBART03G26230
N
0.915
BGIOSGA013132
Oryza indica
BGIOSGA013132
N
0.878
ORGLA03G0243400
Oryza glaberrima
ORGLA03G0243400
N
0.878
OS03G0619600
Oryza sativa
OS03G0619600
N
0.874
OGLUM03G27120
Oryza glumaepatula
OGLUM03G27120
N
0.871
OPUNC03G23960
Oryza punctata
OPUNC03G23960
N
0.861
ORUFI03G27180
Oryza rufipogon
ORUFI03G27180
N
0.815
OPUNC03G23950
Oryza punctata
OPUNC03G23950
N
0.718