CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA03G27260
(
Oryza nivara
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
ONIVA03G27260
T020303_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G27260.1
B3
29
119
FVRRMTADSRRSMIMPCKFVNHFGGDFSGTIKLQSPNGILYAVEVTKCKNKTVLRCGWEAFVDAHHIEENDSLLFRRVENSRFEVLIFDSD
ONIVA03G27260.1
B3
209
310
FVAIMRKSNVQLPTPFLVISFCYAEVHFPHKSVTVTLQRPCKSKKWHPRFYKRKDARMNILRGSWVEFVKDNRVQEQDICVFVPTKDARRNFTFTVHLLRVA
ONIVA03G27260.1
B3
407
508
YVAIMKKSNVERSASRCQLELGARFAAAVHLPDRRQTVVLQRRGERWATVMQIRSGTRRLLISGWHRFVRDNRLRVGDICLFEFKTHERWRLTMAVHAIFRE
ONIVA03G27260.1
B3
741
831
FLRRMAADSMHSMIMPDRFVSHFGGKIPGTIKLESPNGILYVVEVTECMNKTLLQCGWEAFVDAHNIKEGESLLFRHIENSRYEVLILDSD
ONIVA03G27260.1
B3
942
1042
FVAVMKKCNLQSPAPYLVISSRYASVHFPRETATITLQRPSKRKKWYPRFYKRIDKSDHMLRGQWQNFVHDNCLQEEDICLFVPTKGGRNFAFTVHLLQAE
ONIVA03G27260.1
B3
1150
1240
KGKFRGLELSSRYAASYLPDKNHQTLVLQCKGMIWQINLVVRRRYTKGKRWFLTAGWRKFAHDNRLRVGDFCLFELKKKKKLTMEVHIISN
ONIVA03G27260.1
B3
1272
1363
CFLIRMTTDSMHSMIIPDRFVNHFGGKIPGTIKLESPNGILYVVEVTECMNKTVLQCGWEAFVDAHHIKVGDSLLFRHIENSCFEVMILDSD
ONIVA03G27260.1
B3
1507
1599
LISSPCQLELGARYAAAVHLPDRRQAVVLQRMGQRWDTVMQTKSGRCTTRRFLINGWSRFVRDNRLCVGDICLLELKKHESKLTMTVHTIFSQ
Links
Other
B3
family TFs
Other
Oryza nivara
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART03G26230
Oryza barthii
OBART03G26230
N
0.974
OLONG_022274
Oryza longistaminata
OLONG_022274
N
0.929