CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc06g083590.2
(
Solanum lycopersicum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Solyc06g083590.2
T021400_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc06g083590.2.1
B3
445
546
MQKVLKQSDVGHLGRIVLPKKEAESHLPQLETRDGISIAMEDIGTCRVWNMKYRFWPNNKSRMYLLENTGDFVVANGLQEGDFIVIYADIKCGKYLIRGVKV
Links
Other
B3
family TFs
Other
Solanum lycopersicum
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_43744
Aegilops tauschii
F775_43744
N
0.776
AMTR_s00049p00034730
Amborella trichopoda
AMTR_s00049p00034730
N
0.835
Aquca_108_00003
Aquilegia coerulea
Aquca_108_00003
N
0.825
ABI3
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3002399
N
0.856
ABI3
Arabidopsis thaliana
AT3G24650
N
0.856
Bostr.19424s0154
Boechera stricta
Bostr.19424s0154
N
0.856
BRADI2G58390
Brachypodium distachyon
BRADI2G58390
N
0.814
Bo3g083650
Brassica oleracea
Bo3g083650
N
0.845
Bra013248
Brassica rapa
Bra013248
N
0.845
Cagra.2774s0002
Capsella grandiflora
Cagra.2774s0002
N
0.856
Carubv10016094m.g
Capsella rubella
Carubv10016094m.g
N
0.856
evm.TU.supercontig_8.187
Carica papaya
evm.TU.supercontig_8.187
N
0.866
Ca_21518
Cicer arietinum
Ca_21518
N
0.835
Cla015213
Citrullus lanatus
Cla015213
N
0.786
Ciclev10019039m.g
Citrus clementina
Ciclev10019039m.g
N
0.876
orange1.1g038867m.g
Citrus sinensis
orange1.1g038867m.g
N
0.866
Cucsa.078480
Cucumis sativus
Cucsa.078480
N
0.856
Eucgr.H00815
Eucalyptus grandis
Eucgr.H00815
N
0.759
Thhalv10003110m.g
Eutrema salsugineum
Thhalv10003110m.g
N
0.856
gene17562-v1.0-hybrid
Fragaria vesca
gene17562-v1.0-hybrid
N
0.800
GLYMA18G38490
Glycine max
GLYMA18G38490
N
0.837
GLYMA08G47240
Glycine max
GLYMA08G47240
N
0.837
Gorai.001G184300
Gossypium raimondii
Gorai.001G184300
N
0.866
MLOC_69727
Hordeum vulgare
MLOC_69727
N
0.776
LPERR01G35880
Leersia perrieri
LPERR01G35880
N
0.816
Lus10011888.g
Linum usitatissimum
Lus10011888.g
N
0.845
Lus10022820.g
Linum usitatissimum
Lus10022820.g
N
0.866
chr1.CM0147.220.nd
Lotus japonicus
chr1.CM0147.220.nd
N
0.835
MDP0000309680
Malus domestica
MDP0000309680
N
0.835
MDP0000166580
Malus domestica
MDP0000166580
N
0.730
cassava2971.m1
Manihot esculenta
cassava2971.m1
N
0.776
cassava34238.m1
Manihot esculenta
cassava34238.m1
N
0.835
MTR_7g059330
Medicago truncatula
MTR_7g059330
N
0.835
mgf023017m
Mimulus guttatus
mgf023017m
N
0.856
GSMUA_Achr7G23040_001
Musa acuminata
GSMUA_Achr7G23040_001
N
0.825
GSMUA_AchrUn_randomG18520_001
Musa acuminata
GSMUA_AchrUn_randomG18520_001
N
0.825
OBART01G41410
Oryza barthii
OBART01G41410
N
0.806
OB01G50120
Oryza brachyantha
OB01G50120
N
0.816
ORGLA01G0353400
Oryza glaberrima
ORGLA01G0353400
N
0.806
OGLUM01G45580
Oryza glumaepatula
OGLUM01G45580
N
0.806
BGIOSGA000276
Oryza indica
BGIOSGA000276
N
0.806
OLONG_001180
Oryza longistaminata
OLONG_001180
N
0.740
OMERI01G38380
Oryza meridionalis
OMERI01G38380
N
0.740
ONIVA01G46510
Oryza nivara
ONIVA01G46510
N
0.806
ORUFI01G44750
Oryza rufipogon
ORUFI01G44750
N
0.806
VP1
Oryza sativa
OS01G0911700
N
0.755
Pavir.J03563
Panicum virgatum
Pavir.J03563
N
0.825
Pavir.Ea03476
Panicum virgatum
Pavir.Ea03476
N
0.825
POPTR_0002s25330
Populus trichocarpa
POPTR_0002s25330
N
0.866
Pm020417
Prunus mume
Pm020417
N
0.825
PRUPE_ppa001608mg
Prunus persica
PRUPE_ppa001608mg
N
0.825
30204.m001803
Ricinus communis
30204.m001803
N
0.856
SapurV1A.0937s0080
Salix purpurea
SapurV1A.0937s0080
N
0.845
Si000497m.g
Setaria italica
Si000497m.g
N
0.825
Solyc06g083600.1
Solanum lycopersicum
Solyc06g083600.1
N
0.898
PGSC0003DMG400020155
Solanum tuberosum
PGSC0003DMG400020155
N
0.898
PGSC0003DMG400020088
Solanum tuberosum
PGSC0003DMG400020088
N
0.939
Sb03g043480
Sorghum bicolor
Sb03g043480
N
0.814
TCM_003056
Theobroma cacao
TCM_003056
N
0.865
TRAES3BF066400010CFD_g
Triticum aestivum
TRAES3BF066400010CFD_g
N
0.776
ABI3
Vitis vinifera
VIT_07s0005g05400
N
0.825
GRMZM2G133398
Zea mays
GRMZM2G133398
N
0.825