Cla006845 (Citrullus lanatus)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cla006845 T021992_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAV1
M01646_2.00 		Arabidopsis thaliana
NCACCTGAHN
NDTCAGGTGN		 PBM
Weirauch et al.(2014)
pTH8592 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla006845 B3 22 129

Links

Other B3 family TFs
Other Citrullus lanatus TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR06G00460 Leersia perrieri LPERR06G00460 N
LPERR08G03490 Leersia perrieri LPERR08G03490 N
ORGLA08G0028800 Oryza glaberrima ORGLA08G0028800 N 0.708
OGLUM08G03520 Oryza glumaepatula OGLUM08G03520 N 0.708
BGIOSGA028020 Oryza indica BGIOSGA028020 N 0.708
OMERI08G03480 Oryza meridionalis OMERI08G03480 N
ONIVA08G03420 Oryza nivara ONIVA08G03420 N 0.708
OPUNC08G03290 Oryza punctata OPUNC08G03290 N
ORUFI08G03850 Oryza rufipogon ORUFI08G03850 N 0.708
OS08G0157700 Oryza sativa OS08G0157700 N 0.708
Pavir.Fb00403 Panicum virgatum Pavir.Fb00403 N
Pavir.Da02442 Panicum virgatum Pavir.Da02442 N
Si008509m.g Setaria italica Si008509m.g N
Si014362m.g Setaria italica Si014362m.g N
Sb07g003880 Sorghum bicolor Sb07g003880 N
Sb10g000780 Sorghum bicolor Sb10g000780 N
GRMZM2G180168 Zea mays GRMZM2G180168 N
GRMZM2G082227 Zea mays GRMZM2G082227 N 0.832