CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm003827
(
Prunus mume
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pm003827
T022056_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm003827
B3
127
204
FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEWHFRHIFREPLERGEKGELRVGVRRLMR
Pm003827
B3
555
603
LLKKLEEMFDIEGELCGSTKKWQVVYTDDEDDMMMVGDDPWHEFCSMVR
Links
Other
B3
family TFs
Other
Prunus mume
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARF1
Arabidopsis thaliana
AT1G59750
N
0.778
Ciclev10000491m.g
Citrus clementina
Ciclev10000491m.g
N
0.727
gene29255-v1.0-hybrid
Fragaria vesca
gene29255-v1.0-hybrid
N
0.778
Lus10007440.g
Linum usitatissimum
Lus10007440.g
N
0.778
Lus10024455.g
Linum usitatissimum
Lus10024455.g
N
0.709
cassava11453.m1
Manihot esculenta
cassava11453.m1
N
0.709
cassava11454.m1
Manihot esculenta
cassava11454.m1
N
0.709
cassava11455.m1
Manihot esculenta
cassava11455.m1
N
0.709
cassava11456.m1
Manihot esculenta
cassava11456.m1
N
0.709
cassava7098.valid.m1
Manihot esculenta
cassava7098.valid.m1
N
0.709
cassava7099.valid.m1
Manihot esculenta
cassava7099.valid.m1
N
0.709
POPTR_0003s00890
Populus trichocarpa
POPTR_0003s00890
N
0.812
PRUPE_ppa002394mg
Prunus persica
PRUPE_ppa002394mg
N
0.863
29609.m000587
Ricinus communis
29609.m000587
N
0.803
SapurV1A.0422s0040
Salix purpurea
SapurV1A.0422s0040
I
0.718
SapurV1A.0225s0120
Salix purpurea
SapurV1A.0225s0120
N
0.778
Solyc01g103050.2
Solanum lycopersicum
Solyc01g103050.2
N
0.812
PGSC0003DMG400020711
Solanum tuberosum
PGSC0003DMG400020711
I
0.812