CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm005256
(
Prunus mume
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pm005256
T022061_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm005256
B3
129
216
FVKPMLQSHVTGGFWLGLPIHFCNKNLPKRDESVILVDEDGDEYQTVYLANKRGLSGGWRGFAIAHELVDGDALVFQLIRPKTFKVID
Links
Other
B3
family TFs
Other
Prunus mume
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00009p00175450
Amborella trichopoda
AMTR_s00009p00175450
I
0.000
evm.TU.supercontig_81.11
Carica papaya
evm.TU.supercontig_81.11
N
0.000
Eucgr.K00871
Eucalyptus grandis
Eucgr.K00871
N
0.000
GLYMA12G34300
Glycine max
GLYMA12G34300
I
0.000
Gorai.013G164100
Gossypium raimondii
Gorai.013G164100
I
0.000
Gorai.002G081900
Gossypium raimondii
Gorai.002G081900
I
0.000
Lus10020069.g
Linum usitatissimum
Lus10020069.g
N
0.000
cassava19334.valid.m1
Manihot esculenta
cassava19334.valid.m1
N
0.000
mgf012088m
Mimulus guttatus
mgf012088m
I
0.000
POPTR_0004s03190
Populus trichocarpa
POPTR_0004s03190
N
0.000
SapurV1A.0028s0330
Salix purpurea
SapurV1A.0028s0330
N
0.000
SapurV1A.0502s0080
Salix purpurea
SapurV1A.0502s0080
N
0.000
SELMODRAFT_431241
Selaginella moellendorffii
SELMODRAFT_431241
I
0.000
SELMODRAFT_405883
Selaginella moellendorffii
SELMODRAFT_405883
I
0.000
Solyc07g064040.2
Solanum lycopersicum
Solyc07g064040.2
I
0.000
PGSC0003DMG400019263
Solanum tuberosum
PGSC0003DMG400019263
I
0.000
VIT_19s0014g05100
Vitis vinifera
VIT_19s0014g05100
N
0.000