cassava14836.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava14836.m1 T022223_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.804 0.804
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14836.m1 B3 56 154

Links

Other B3 family TFs
Other Manihot esculenta TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CD36_73890 Candida dubliniensis CD36_73890 N
G210_1949 Candida maltosa G210_1949 N
CORT_0H00800 Candida orthopsilosis CORT_0H00800 N
CPAG_01644 Candida parapsilosis CPAG_01644 N
CANTEDRAFT_113769 Candida tenuis CANTEDRAFT_113769 N
CTRG_04979 Candida tropicalis CTRG_04979 N
LELG_05572 Lodderomyces elongisporus LELG_05572 N
GNLVRS01_PISO0I07224g Millerozyma farinosa GNLVRS01_PISO0I07224g N
GNLVRS01_PISO0J09051g Millerozyma farinosa GNLVRS01_PISO0J09051g N
fgenesh1_pg.C_chr_5.1000668 Pichia stipitis fgenesh1_pg.C_chr_5.1000668 N
PICST_32504 Scheffersomyces stipitis PICST_32504 N
SPAPADRAFT_63801 Spathaspora passalidarum SPAPADRAFT_63801 N
YALI0_C12364g Yarrowia lipolytica YALI0_C12364g N