cassava14836.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava14836.m1 T022223_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.804 0.804
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14836.m1 B3 56 154

Links

Other B3 family TFs
Other Manihot esculenta TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava11393.m1 Manihot esculenta cassava11393.m1 I 0.887
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.880
30131.m006860 Ricinus communis 30131.m006860 I 0.880
TCM_017321 Theobroma cacao TCM_017321 I 0.837
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.826
Pm016099 Prunus mume Pm016099 I 0.826
LjSGA_037319.1 Lotus japonicus LjSGA_037319.1 I 0.794
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.793
Bo00285s530 Brassica oleracea Bo00285s530 I 0.793
Bra032953 Brassica rapa Bra032953 I 0.793
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.786
Ca_05976 Cicer arietinum Ca_05976 I 0.783
Cla009252 Citrullus lanatus Cla009252 I 0.783
MDP0000268649 Malus domestica MDP0000268649 I 0.776
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.768
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.765
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.755
FUS3 Arabidopsis thaliana AT3G26790 D 0.755
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.755
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.755
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.745
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.742
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.737
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.737
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.728
Bo7g083910 Brassica oleracea Bo7g083910 I 0.726
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.724