cassava11393.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava11393.m1 T022213_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FUS3
M06706_2.00 		Arabidopsis thaliana
WNHWTGCATGYDHDW
WHDHRCATGCAWDNW		 Dap-seq
OMalley et al.(2016)
FUS3_col_a 		0.835 0.835
FUS3
M09773_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FUS3_Q2 		0.835 0.835
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava11393.m1 B3 168 270

Links

Other B3 family TFs
Other Manihot esculenta TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m006860 Ricinus communis 30131.m006860 I 0.948
POPTR_0001s32990 Populus trichocarpa POPTR_0001s32990 I 0.928
cassava14836.m1 Manihot esculenta cassava14836.m1 I 0.887
TCM_017321 Theobroma cacao TCM_017321 I 0.887
orange1.1g041864m.g Citrus sinensis orange1.1g041864m.g I 0.879
Pm016099 Prunus mume Pm016099 I 0.876
Ciclev10016085m.g Citrus clementina Ciclev10016085m.g I 0.866
PRUPE_ppa021307mg Prunus persica PRUPE_ppa021307mg I 0.857
Gorai.001G273500 Gossypium raimondii Gorai.001G273500 I 0.857
POPTR_0017s08820 Populus trichocarpa POPTR_0017s08820 I 0.856
GLYMA19G27336 Glycine max GLYMA19G27336 I 0.835
FUS3 Arabidopsis thaliana AT3G26790 D 0.835
Bostr.0556s0351 Boechera stricta Bostr.0556s0351 I 0.827
Ca_05976 Cicer arietinum Ca_05976 I 0.825
GLYMA16G05480 Glycine max GLYMA16G05480 I 0.825
FUS3 Arabidopsis lyrata fgenesh2_kg.5__447__AT3G26790.1 I 0.825
Bra032953 Brassica rapa Bra032953 I 0.814
MTR_7g083700 Medicago truncatula MTR_7g083700 I 0.814
Bo00285s530 Brassica oleracea Bo00285s530 I 0.814
Cla009252 Citrullus lanatus Cla009252 I 0.814
Carubv10019353m.g Capsella rubella Carubv10019353m.g I 0.808
Cagra.1841s0002 Capsella grandiflora Cagra.1841s0002 I 0.808
evm.TU.supercontig_70.84 Carica papaya evm.TU.supercontig_70.84 I 0.800
Thhalv10005481m.g Eutrema salsugineum Thhalv10005481m.g I 0.796
Bo7g083910 Brassica oleracea Bo7g083910 I 0.779
Lus10012572.g Linum usitatissimum Lus10012572.g I 0.773
Lus10041521.g Linum usitatissimum Lus10041521.g I 0.745
FUS3 Vitis vinifera VIT_14s0068g01290 I 0.707