CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10030084m.g
(
Citrus clementina
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Ciclev10030084m.g
T022981_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10030084m
B3
39
130
FIKFMLRSHVTGGFWLGLSRKFCTDNLPKQDTMIVLEDESGSEYDTKYLVEKIGLSAGWRGFSIAHKLVEGDALVFHLVTPSKFKVYIVRSR
Links
Other
B3
family TFs
Other
Citrus clementina
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK02558.1
Cannabis sativa
PK02558.1
N
0.707
evm.TU.supercontig_62.24
Carica papaya
evm.TU.supercontig_62.24
N
0.717
orange1.1g036935m.g
Citrus sinensis
orange1.1g036935m.g
N
0.978
Gorai.002G007600
Gossypium raimondii
Gorai.002G007600
N
0.739
MDP0000155544
Malus domestica
MDP0000155544
N
0.761
Pm021349
Prunus mume
Pm021349
N
0.761
PRUPE_ppa015021mg
Prunus persica
PRUPE_ppa015021mg
N
0.739
TCM_007038
Theobroma cacao
TCM_007038
N
0.717