evm.TU.supercontig_115.30 (Carica papaya)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 evm.TU.supercontig_115.30 T023117_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.810 0.810
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.797 0.797
ARF3
M00852_2.00 		Arabidopsis thaliana
NKGTYBNN
NNVRACMN		 PBM
Franco-Zorrilla et al.(2014)
ETTIN 		0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_115.30 B3 176 259

Links

Other B3 family TFs
Other Carica papaya TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07729 Aegilops tauschii F775_07729 I 0.755
F775_09095 Aegilops tauschii F775_09095 I 0.729
F775_17365 Aegilops tauschii F775_17365 I 0.710
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.924
AMTR_s00025p00198750 Amborella trichopoda AMTR_s00025p00198750 I 0.724
AMTR_s00211p00025860 Amborella trichopoda AMTR_s00211p00025860 I 0.704
Aquca_002_01425 Aquilegia coerulea Aquca_002_01425 I 0.835
Aquca_008_00175 Aquilegia coerulea Aquca_008_00175 I 0.709
Aquca_018_00174 Aquilegia coerulea Aquca_018_00174 I 0.755
ARF19 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001739 N 0.700
NPH4 Arabidopsis lyrata fgenesh2_kg.6__2115__AT5G20730.1 I 0.714
ARF19 Arabidopsis thaliana AT1G19220 I 0.714
NPH4 Arabidopsis thaliana AT5G20730 I 0.714
Bostr.26527s0132 Boechera stricta Bostr.26527s0132 I 0.714
Bostr.7128s0527 Boechera stricta Bostr.7128s0527 I 0.714
BRADI1G34340 Brachypodium distachyon BRADI1G34340 I 0.755
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.835
BRADI3G03407 Brachypodium distachyon BRADI3G03407 I 0.704
BRADI3G40437 Brachypodium distachyon BRADI3G40437 I 0.704
BRADI3G45880 Brachypodium distachyon BRADI3G45880 I 0.722
Bo2g023110 Brassica oleracea Bo2g023110 I 0.714
Bo4g136370 Brassica oleracea Bo4g136370 I 0.823
Bo5g027250 Brassica oleracea Bo5g027250 I 0.714
Bo6g099440 Brassica oleracea Bo6g099440 I 0.759
Bo9g151530 Brassica oleracea Bo9g151530 I 0.704
Bra002327 Brassica rapa Bra002327 I 0.704
Bra004125 Brassica rapa Bra004125 I 0.759
Bra020125 Brassica rapa Bra020125 I 0.714
Bra021885 Brassica rapa Bra021885 I 0.709
Bra025720 Brassica rapa Bra025720 I 0.714
Bra028110 Brassica rapa Bra028110 I 0.823
PK20354.1 Cannabis sativa PK20354.1 I 0.776
PK26077.1 Cannabis sativa PK26077.1 I 0.848
Cagra.1796s0004 Capsella grandiflora Cagra.1796s0004 I 0.714
Cagra.1961s0078 Capsella grandiflora Cagra.1961s0078 I 0.714
Carubv10000065m.g Capsella rubella Carubv10000065m.g I 0.886
Carubv10008159m.g Capsella rubella Carubv10008159m.g I 0.714
evm.TU.supercontig_108.15 Carica papaya evm.TU.supercontig_108.15 I 0.746
evm.TU.supercontig_26.25 Carica papaya evm.TU.supercontig_26.25 I 0.835
Ca_05876 Cicer arietinum Ca_05876 N 0.754
Ca_19289 Cicer arietinum Ca_19289 I 0.714
Cla005884 Citrullus lanatus Cla005884 I 0.755
Cla009258 Citrullus lanatus Cla009258 I 0.750
Cla019844 Citrullus lanatus Cla019844 I 0.861
Ciclev10007292m.g Citrus clementina Ciclev10007292m.g I 0.755
Ciclev10014200m.g Citrus clementina Ciclev10014200m.g I 0.785
Ciclev10027839m.g Citrus clementina Ciclev10027839m.g I 0.709
orange1.1g001969m.g Citrus sinensis orange1.1g001969m.g I 0.755
orange1.1g002390m.g Citrus sinensis orange1.1g002390m.g I 0.785
orange1.1g003544m.g Citrus sinensis orange1.1g003544m.g I 0.717
orange1.1g003580m.g Citrus sinensis orange1.1g003580m.g I 0.709
Cucsa.071070 Cucumis sativus Cucsa.071070 I 0.755
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.865
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.861
Cucsa.173470 Cucumis sativus Cucsa.173470 I 0.763
Eucgr.C02178 Eucalyptus grandis Eucgr.C02178 I 0.735
Eucgr.C03293 Eucalyptus grandis Eucgr.C03293 I 0.714
Thhalv10006635m.g Eutrema salsugineum Thhalv10006635m.g I 0.714
Thhalv10012513m.g Eutrema salsugineum Thhalv10012513m.g I 0.714
gene12224-v1.0-hybrid Fragaria vesca gene12224-v1.0-hybrid I 0.745
gene12917-v1.0-hybrid Fragaria vesca gene12917-v1.0-hybrid I 0.724
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.848
GLYMA09G08350 Glycine max GLYMA09G08350 I 0.724
GLYMA15G19980 Glycine max GLYMA15G19980 I 0.724
Gorai.001G017000 Gossypium raimondii Gorai.001G017000 I 0.724
Gorai.009G037100 Gossypium raimondii Gorai.009G037100 I 0.735
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.848
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I 0.911
Gorai.012G009000 Gossypium raimondii Gorai.012G009000 I 0.714
MLOC_14584 Hordeum vulgare MLOC_14584 I 0.861
MLOC_63193 Hordeum vulgare MLOC_63193 I 0.745
MLOC_73144 Hordeum vulgare MLOC_73144 I 0.714
LPERR02G03100 Leersia perrieri LPERR02G03100 I 0.755
LPERR06G22130 Leersia perrieri LPERR06G22130 I 0.765
LPERR08G17530 Leersia perrieri LPERR08G17530 I 0.714
Lus10007386.g Linum usitatissimum Lus10007386.g I 0.835
Lus10010969.g Linum usitatissimum Lus10010969.g I 0.835
Lus10022943.g Linum usitatissimum Lus10022943.g I 0.765
Lus10024320.g Linum usitatissimum Lus10024320.g I 0.823
Lus10027600.g Linum usitatissimum Lus10027600.g I 0.765
Lus10031354.g Linum usitatissimum Lus10031354.g I 0.835
Lus10033635.g Linum usitatissimum Lus10033635.g I 0.735
chr2.CM0373.570.nc Lotus japonicus chr2.CM0373.570.nc I 0.735
chr6.CM0420.10.nd Lotus japonicus chr6.CM0420.10.nd N 0.779
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 0.846
LjSGA_026543.1 Lotus japonicus LjSGA_026543.1 I 0.780
LjSGA_144865.1 Lotus japonicus LjSGA_144865.1 I 0.707
MDP0000143749 Malus domestica MDP0000143749 I 0.861
MDP0000185253 Malus domestica MDP0000185253 I 0.765
MDP0000268306 Malus domestica MDP0000268306 I 0.848
MDP0000876321 Malus domestica MDP0000876321 I 0.724
MDP0000886637 Malus domestica MDP0000886637 I 0.724
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.848
cassava25060.valid.m1 Manihot esculenta cassava25060.valid.m1 I 0.724
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.848
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.848
cassava30265.valid.m1 Manihot esculenta cassava30265.valid.m1 I 0.835
cassava30266.valid.m1 Manihot esculenta cassava30266.valid.m1 I 0.835
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.848
cassava35541.valid.m1 Manihot esculenta cassava35541.valid.m1 I 0.835
cassava44112.valid.m1 Manihot esculenta cassava44112.valid.m1 I 0.776
MTR_2g043250 Medicago truncatula MTR_2g043250 I 0.886
MTR_4g124900 Medicago truncatula MTR_4g124900 I 0.886
MTR_5g076270 Medicago truncatula MTR_5g076270 I 0.835
MTR_8g101360 Medicago truncatula MTR_8g101360 I 0.704
mgf005961m Mimulus guttatus mgf005961m I 0.835
mgf007171m Mimulus guttatus mgf007171m I 0.714
mgf012918m Mimulus guttatus mgf012918m I 0.714
GSMUA_Achr11G25770_001 Musa acuminata GSMUA_Achr11G25770_001 I 0.823
GSMUA_Achr1G20000_001 Musa acuminata GSMUA_Achr1G20000_001 I 0.768
GSMUA_Achr3G05460_001 Musa acuminata GSMUA_Achr3G05460_001 I 0.787
GSMUA_Achr5G05010_001 Musa acuminata GSMUA_Achr5G05010_001 I 0.724
GSMUA_Achr6G01740_001 Musa acuminata GSMUA_Achr6G01740_001 I 0.763
GSMUA_Achr6G19850_001 Musa acuminata GSMUA_Achr6G19850_001 I 0.759
GSMUA_Achr8G23850_001 Musa acuminata GSMUA_Achr8G23850_001 I 0.724
GSMUA_Achr9G14090_001 Musa acuminata GSMUA_Achr9G14090_001 I 0.755
GSMUA_Achr9G18170_001 Musa acuminata GSMUA_Achr9G18170_001 I 0.704
OBART02G03410 Oryza barthii OBART02G03410 I 0.755
OBART06G26550 Oryza barthii OBART06G26550 I 0.765
OBART08G20780 Oryza barthii OBART08G20780 I 0.745
OB01G35190 Oryza brachyantha OB01G35190 I 0.722
OB02G13010 Oryza brachyantha OB02G13010 I 0.755
OB05G33320 Oryza brachyantha OB05G33320 I 0.709
OB06G15720 Oryza brachyantha OB06G15720 I 0.848
OB06G34290 Oryza brachyantha OB06G34290 I 0.765
OB08G27580 Oryza brachyantha OB08G27580 I 0.735
ORGLA02G0031900 Oryza glaberrima ORGLA02G0031900 I 0.755
ORGLA06G0221800 Oryza glaberrima ORGLA06G0221800 I 0.765
ORGLA08G0183900 Oryza glaberrima ORGLA08G0183900 I 0.745
OGLUM02G03280 Oryza glumaepatula OGLUM02G03280 I 0.755
OGLUM06G27960 Oryza glumaepatula OGLUM06G27960 I 0.765
OGLUM08G22050 Oryza glumaepatula OGLUM08G22050 I 0.745
BGIOSGA007153 Oryza indica BGIOSGA007153 I 0.763
BGIOSGA014158 Oryza indica BGIOSGA014158 I 0.733
BGIOSGA023559 Oryza indica BGIOSGA023559 I 0.765
BGIOSGA026655 Oryza indica BGIOSGA026655 I 0.745
OLONG_021742 Oryza longistaminata OLONG_021742 I 0.755
OMERI02G01870 Oryza meridionalis OMERI02G01870 I 0.745
OMERI02G04100 Oryza meridionalis OMERI02G04100 I 0.755
OMERI04G24630 Oryza meridionalis OMERI04G24630 I 0.764
OMERI06G26660 Oryza meridionalis OMERI06G26660 I 0.765
ONIVA02G03290 Oryza nivara ONIVA02G03290 I 0.755
ONIVA06G29090 Oryza nivara ONIVA06G29090 I 0.765
ONIVA08G23730 Oryza nivara ONIVA08G23730 I 0.745
OPUNC02G02660 Oryza punctata OPUNC02G02660 I 0.755
OPUNC06G24250 Oryza punctata OPUNC06G24250 I 0.765
OPUNC08G18850 Oryza punctata OPUNC08G18850 I 0.745
ORUFI02G03320 Oryza rufipogon ORUFI02G03320 I 0.755
ORUFI06G26570 Oryza rufipogon ORUFI06G26570 I 0.760
ORUFI06G28510 Oryza rufipogon ORUFI06G28510 I 0.765
ORUFI08G23260 Oryza rufipogon ORUFI08G23260 I 0.745
OS02G0141100 Oryza sativa OS02G0141100 I 0.755
OS06G0702600 Oryza sativa OS06G0702600 I 0.765
OS08G0520550 Oryza sativa OS08G0520550 I 0.745
Pavir.Aa01676 Panicum virgatum Pavir.Aa01676 I 0.722
Pavir.Db00232 Panicum virgatum Pavir.Db00232 I 0.735
Pavir.Fa00483 Panicum virgatum Pavir.Fa00483 I 0.724
Pavir.Fb01896 Panicum virgatum Pavir.Fb01896 I 0.724
Pavir.Gb00274 Panicum virgatum Pavir.Gb00274 I 0.754
Pavir.J00164 Panicum virgatum Pavir.J00164 I 0.735
Pavir.J32718 Panicum virgatum Pavir.J32718 I 0.714
PDK_20s1359912g002 Phoenix dactylifera PDK_20s1359912g002 I 0.703
PDK_20s1375001g001 Phoenix dactylifera PDK_20s1375001g001 I 0.722
PDK_20s1410001g001 Phoenix dactylifera PDK_20s1410001g001 I 0.773
POPTR_0006s07740 Populus trichocarpa POPTR_0006s07740 I 0.765
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.924
POPTR_0018s07420 Populus trichocarpa POPTR_0018s07420 I 0.714
POPTR_0018s14300 Populus trichocarpa POPTR_0018s14300 I 0.765
Pm008963 Prunus mume Pm008963 I 0.765
Pm010467 Prunus mume Pm010467 I 0.848
Pm027119 Prunus mume Pm027119 I 0.886
PRUPE_ppa000479mg Prunus persica PRUPE_ppa000479mg I 0.765
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I 0.886
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.848
PRUPE_ppa024354mg Prunus persica PRUPE_ppa024354mg I 0.705
29599.m000177 Ricinus communis 29599.m000177 I 0.848
29739.m003713 Ricinus communis 29739.m003713 I 0.924
29769.m000463 Ricinus communis 29769.m000463 I 0.835
30185.m000956 Ricinus communis 30185.m000956 I 0.765
SapurV1A.0001s2530 Salix purpurea SapurV1A.0001s2530 I 0.765
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I 0.848
SapurV1A.0355s0030 Salix purpurea SapurV1A.0355s0030 I 0.835
SapurV1A.0521s0030 Salix purpurea SapurV1A.0521s0030 I 0.745
SapurV1A.0870s0230 Salix purpurea SapurV1A.0870s0230 I 0.745
SapurV1A.2095s0020 Salix purpurea SapurV1A.2095s0020 I 0.745
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.818
Si005741m.g Setaria italica Si005741m.g I 0.735
Si013155m.g Setaria italica Si013155m.g I 0.714
Si016147m.g Setaria italica Si016147m.g I 0.714
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.848
Solyc05g047460.2 Solanum lycopersicum Solyc05g047460.2 I 0.724
Solyc07g016180.2 Solanum lycopersicum Solyc07g016180.2 I 0.701
Solyc12g006350.1 Solanum lycopersicum Solyc12g006350.1 I 0.736
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.848
PGSC0003DMG400009773 Solanum tuberosum PGSC0003DMG400009773 I 0.701
PGSC0003DMG400013686 Solanum tuberosum PGSC0003DMG400013686 I 0.724
Sb04g003240 Sorghum bicolor Sb04g003240 I 0.735
Sb07g027080 Sorghum bicolor Sb07g027080 I 0.724
Sb08g021460 Sorghum bicolor Sb08g021460 I 0.848
Sb10g029130 Sorghum bicolor Sb10g029130 I 0.755
TCM_029410 Theobroma cacao TCM_029410 I 0.848
TCM_037484 Theobroma cacao TCM_037484 I 0.745
TCM_039715 Theobroma cacao TCM_039715 I 0.776
Traes_2AL_98457FFEE Triticum aestivum Traes_2AL_98457FFEE I 0.770
Traes_2BL_889C1F272 Triticum aestivum Traes_2BL_889C1F272 I 0.710
Traes_6AS_967D58FB4 Triticum aestivum Traes_6AS_967D58FB4 I 0.714
Traes_6BS_444DFA94E Triticum aestivum Traes_6BS_444DFA94E I 0.714
Traes_6DS_8BE5BE6AC Triticum aestivum Traes_6DS_8BE5BE6AC I 0.714
Traes_7AL_F36D340F4 Triticum aestivum Traes_7AL_F36D340F4 I 0.755
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.861
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.861
Traes_7DL_343A252DC Triticum aestivum Traes_7DL_343A252DC I 0.755
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.861
TRIUR3_19224 Triticum urartu TRIUR3_19224 I 0.729
TRIUR3_25750 Triticum urartu TRIUR3_25750 I 0.755
TRIUR3_26420 Triticum urartu TRIUR3_26420 I 0.731
VIT_03s0167g00010 Vitis vinifera VIT_03s0167g00010 I 0.859
VIT_04s0079g00160 Vitis vinifera VIT_04s0079g00160 I 0.734
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.848
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.911
VIT_11s0065g00310 Vitis vinifera VIT_11s0065g00310 I 0.765
GRMZM2G081158 Zea mays GRMZM2G081158 I 0.848
GRMZM2G102845 Zea mays GRMZM2G102845 I 0.899
GRMZM2G169820 Zea mays GRMZM2G169820 I 0.714
GRMZM2G317900 Zea mays GRMZM2G317900 I 0.745
GRMZM2G702026 Zea mays GRMZM2G702026 I 0.722