VIT_04s0079g00160 (Vitis vinifera)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 VIT_04s0079g00160 T021888_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.812 0.812
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_04s0079g00160.t01 B3 128 196

Links

Other B3 family TFs
Other Vitis vinifera TFs

280 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_022975.2 Lotus japonicus LjSGA_022975.2 I 1.000
SapurV1A.4298s0010 Salix purpurea SapurV1A.4298s0010 I 0.982
evm.TU.supercontig_108.15 Carica papaya evm.TU.supercontig_108.15 I 0.875
LjSGA_026543.1 Lotus japonicus LjSGA_026543.1 I 0.875
ORUFI06G26570 Oryza rufipogon ORUFI06G26570 I 0.860
MTR_5g076270 Medicago truncatula MTR_5g076270 I 0.859
29769.m000463 Ricinus communis 29769.m000463 I 0.859
cassava30265.valid.m1 Manihot esculenta cassava30265.valid.m1 I 0.859
cassava30266.valid.m1 Manihot esculenta cassava30266.valid.m1 I 0.859
cassava35541.valid.m1 Manihot esculenta cassava35541.valid.m1 I 0.859
Aquca_002_01425 Aquilegia coerulea Aquca_002_01425 I 0.859
Lus10007386.g Linum usitatissimum Lus10007386.g I 0.859
Lus10010969.g Linum usitatissimum Lus10010969.g I 0.859
Lus10031354.g Linum usitatissimum Lus10031354.g I 0.859
BGIOSGA035840 Oryza indica BGIOSGA035840 I 0.844
OBART12G18720 Oryza barthii OBART12G18720 I 0.844
OGLUM12G20370 Oryza glumaepatula OGLUM12G20370 I 0.844
OLONG_025769 Oryza longistaminata OLONG_025769 I 0.844
OMERI12G13970 Oryza meridionalis OMERI12G13970 I 0.844
ONIVA12G17670 Oryza nivara ONIVA12G17670 I 0.844
OPUNC12G16920 Oryza punctata OPUNC12G16920 I 0.844
ORGLA12G0159700 Oryza glaberrima ORGLA12G0159700 I 0.844
ORUFI12G20920 Oryza rufipogon ORUFI12G20920 I 0.844
ARF25 Oryza sativa OS12G0613700 I 0.844
POPTR_0011s09450 Populus trichocarpa POPTR_0011s09450 I 0.844
POPTR_0017s01870 Populus trichocarpa POPTR_0017s01870 I 0.844
PRUPE_ppa001179mg Prunus persica PRUPE_ppa001179mg I 0.844
TCM_001906 Theobroma cacao TCM_001906 I 0.844
TCM_017488 Theobroma cacao TCM_017488 I 0.844
TCM_029410 Theobroma cacao TCM_029410 I 0.844
ARF6 Vitis vinifera VIT_10s0003g04100 I 0.844
Ca_15694 Cicer arietinum Ca_15694 I 0.844
Cla009963 Citrullus lanatus Cla009963 I 0.844
Pm010467 Prunus mume Pm010467 I 0.844
29599.m000177 Ricinus communis 29599.m000177 I 0.844
cassava2408.valid.m1 Manihot esculenta cassava2408.valid.m1 I 0.844
cassava29103.valid.m1 Manihot esculenta cassava29103.valid.m1 I 0.844
cassava29104.valid.m1 Manihot esculenta cassava29104.valid.m1 I 0.844
cassava32201.m1 Manihot esculenta cassava32201.m1 I 0.844
Cucsa.047990 Cucumis sativus Cucsa.047990 I 0.844
Ciclev10011065m.g Citrus clementina Ciclev10011065m.g I 0.844
Ciclev10014198m.g Citrus clementina Ciclev10014198m.g I 0.844
gene30394-v1.0-hybrid Fragaria vesca gene30394-v1.0-hybrid I 0.844
gene31631-v1.0-hybrid Fragaria vesca gene31631-v1.0-hybrid I 0.844
Gorai.008G054600 Gossypium raimondii Gorai.008G054600 I 0.844
Gorai.009G152700 Gossypium raimondii Gorai.009G152700 I 0.844
MDP0000268306 Malus domestica MDP0000268306 I 0.844
MDP0000294251 Malus domestica MDP0000294251 I 0.844
orange1.1g002624m.g Citrus sinensis orange1.1g002624m.g I 0.844
orange1.1g003544m.g Citrus sinensis orange1.1g003544m.g I 0.844
SapurV1A.0030s0180 Salix purpurea SapurV1A.0030s0180 I 0.844
SapurV1A.0147s0210 Salix purpurea SapurV1A.0147s0210 I 0.844
PK26077.1 Cannabis sativa PK26077.1 I 0.844
PRUPE_ppa024354mg Prunus persica PRUPE_ppa024354mg I 0.836
AMTR_s00092p00072950 Amborella trichopoda AMTR_s00092p00072950 I 0.828
F775_00614 Aegilops tauschii F775_00614 I 0.828
GLYMA18G05330 Glycine max GLYMA18G05330 I 0.828
GSMUA_Achr11G01610_001 Musa acuminata GSMUA_Achr11G01610_001 I 0.828
LPERR12G15750 Leersia perrieri LPERR12G15750 I 0.828
PGSC0003DMG401018664 Solanum tuberosum PGSC0003DMG401018664 I 0.828
Traes_2BL_889C1F272 Triticum aestivum Traes_2BL_889C1F272 I 0.828
VIT_00s1203g00010 Vitis vinifera VIT_00s1203g00010 I 0.828
VIT_03s0167g00010 Vitis vinifera VIT_03s0167g00010 I 0.828
Cla009258 Citrullus lanatus Cla009258 I 0.828
Cla019844 Citrullus lanatus Cla019844 I 0.828
Cucsa.152170 Cucumis sativus Cucsa.152170 I 0.828
Aquca_022_00246 Aquilegia coerulea Aquca_022_00246 I 0.828
Gorai.011G048200 Gossypium raimondii Gorai.011G048200 I 0.828
MDP0000232417 Malus domestica MDP0000232417 I 0.828
MDP0000550049 Malus domestica MDP0000550049 I 0.828
SapurV1A.0355s0030 Salix purpurea SapurV1A.0355s0030 I 0.828
SapurV1A.1257s0090 Salix purpurea SapurV1A.1257s0090 I 0.828
ARF8 Arabidopsis thaliana AT5G37020 D 0.812
Bo4g136370 Brassica oleracea Bo4g136370 I 0.812
Bra028110 Brassica rapa Bra028110 I 0.812
BRADI5G25767 Brachypodium distachyon BRADI5G25767 I 0.812
ARF8 Arabidopsis lyrata fgenesh2_kg.7__3131__AT5G37020.1 I 0.812
GRMZM2G081158 Zea mays GRMZM2G081158 I 0.812
GSMUA_Achr11G25770_001 Musa acuminata GSMUA_Achr11G25770_001 I 0.812
GSMUA_Achr5G00590_001 Musa acuminata GSMUA_Achr5G00590_001 I 0.812
MLOC_51932 Hordeum vulgare MLOC_51932 I 0.812
OB12G25550 Oryza brachyantha OB12G25550 I 0.812
Sb08g021460 Sorghum bicolor Sb08g021460 I 0.812
Traes_2AL_A7941CB12 Triticum aestivum Traes_2AL_A7941CB12 I 0.812
Traes_2DL_8434C0251 Triticum aestivum Traes_2DL_8434C0251 I 0.812
mgf005961m Mimulus guttatus mgf005961m I 0.812
BRADI4G01730 Brachypodium distachyon BRADI4G01730 I 0.797
GLYMA05G27580 Glycine max GLYMA05G27580 I 0.797
GLYMA08G10550 Glycine max GLYMA08G10550 I 0.797
GSMUA_Achr3G23290_001 Musa acuminata GSMUA_Achr3G23290_001 I 0.797
GSMUA_AchrUn_randomG06460_001 Musa acuminata GSMUA_AchrUn_randomG06460_001 I 0.797
Cucsa.173470 Cucumis sativus Cucsa.173470 I 0.797
Cucsa.117420 Cucumis sativus Cucsa.117420 I 0.788
ARF6 Oryza indica BGIOSGA007604 I 0.781
BRADI3G04920 Brachypodium distachyon BRADI3G04920 I 0.781
F775_09991 Aegilops tauschii F775_09991 I 0.781
GSMUA_Achr8G13630_001 Musa acuminata GSMUA_Achr8G13630_001 I 0.781
LPERR02G04280 Leersia perrieri LPERR02G04280 I 0.781
MLOC_66152 Hordeum vulgare MLOC_66152 I 0.781
OBART02G04960 Oryza barthii OBART02G04960 I 0.781
OGLUM02G04770 Oryza glumaepatula OGLUM02G04770 I 0.781
OLONG_020465 Oryza longistaminata OLONG_020465 I 0.781
OMERI02G05780 Oryza meridionalis OMERI02G05780 I 0.781
ONIVA02G05150 Oryza nivara ONIVA02G05150 I 0.781
OPUNC02G04120 Oryza punctata OPUNC02G04120 I 0.781
ORGLA02G0045800 Oryza glaberrima ORGLA02G0045800 I 0.781
ORUFI02G05060 Oryza rufipogon ORUFI02G05060 I 0.781
ARF6 Oryza sativa OS02G0164900 I 0.781
Traes_6DS_F95C12EBB Triticum aestivum Traes_6DS_F95C12EBB I 0.781
Ca_05025 Cicer arietinum Ca_05025 I 0.781
Lus10017640.g Linum usitatissimum Lus10017640.g I 0.781
Lus10017641.g Linum usitatissimum Lus10017641.g I 0.781
Lus10033597.g Linum usitatissimum Lus10033597.g I 0.781
Lus10033598.g Linum usitatissimum Lus10033598.g I 0.781
SapurV1A.0289s0180 Salix purpurea SapurV1A.0289s0180 I 0.781
TRIUR3_22410 Triticum urartu TRIUR3_22410 I 0.768
AMTR_s00007p00267580 Amborella trichopoda AMTR_s00007p00267580 I 0.766
MLOC_58330 Hordeum vulgare MLOC_58330 I 0.766
OMERI04G24630 Oryza meridionalis OMERI04G24630 I 0.766
Sb10g027220 Sorghum bicolor Sb10g027220 I 0.766
SELMODRAFT_179736 Selaginella moellendorffii SELMODRAFT_179736 I 0.766
SELMODRAFT_451392 Selaginella moellendorffii SELMODRAFT_451392 I 0.766
Traes_7BL_66296695F Triticum aestivum Traes_7BL_66296695F I 0.766
Traes_7DL_C89614A4D Triticum aestivum Traes_7DL_C89614A4D I 0.766
TRIUR3_26420 Triticum urartu TRIUR3_26420 I 0.766
mgf003543m Mimulus guttatus mgf003543m I 0.766
Gorai.008G097200 Gossypium raimondii Gorai.008G097200 I 0.766
PDK_20s1359912g002 Phoenix dactylifera PDK_20s1359912g002 I 0.766
BRADI1G46602 Brachypodium distachyon BRADI1G46602 I 0.750
GLYMA02G45100 Glycine max GLYMA02G45100 I 0.750
GLYMA14G03650 Glycine max GLYMA14G03650 I 0.750
GSMUA_Achr9G14090_001 Musa acuminata GSMUA_Achr9G14090_001 I 0.750
MLOC_14584 Hordeum vulgare MLOC_14584 I 0.750
POPTR_0006s14070 Populus trichocarpa POPTR_0006s14070 I 0.750
POPTR_0018s14300 Populus trichocarpa POPTR_0018s14300 I 0.750
PRUPE_ppa000479mg Prunus persica PRUPE_ppa000479mg I 0.750
PRUPE_ppa001069mg Prunus persica PRUPE_ppa001069mg I 0.750
Sb04g003240 Sorghum bicolor Sb04g003240 I 0.750
Si005753m.g Setaria italica Si005753m.g I 0.750
Solyc02g037530.2 Solanum lycopersicum Solyc02g037530.2 I 0.750
TCM_037484 Theobroma cacao TCM_037484 I 0.750
Traes_7AS_582E3076D Triticum aestivum Traes_7AS_582E3076D I 0.750
Traes_7BS_F44A273F8 Triticum aestivum Traes_7BS_F44A273F8 I 0.750
Traes_7DS_1948388F8 Triticum aestivum Traes_7DS_1948388F8 I 0.750
Pm008963 Prunus mume Pm008963 I 0.750
Pm014818 Prunus mume Pm014818 I 0.750
29739.m003713 Ricinus communis 29739.m003713 I 0.750
mgf007038m Mimulus guttatus mgf007038m I 0.750
mgf012918m Mimulus guttatus mgf012918m I 0.750
Ciclev10007292m.g Citrus clementina Ciclev10007292m.g I 0.750
Eucgr.A02065 Eucalyptus grandis Eucgr.A02065 I 0.750
evm.TU.supercontig_17.53 Carica papaya evm.TU.supercontig_17.53 I 0.750
gene22728-v1.0-hybrid Fragaria vesca gene22728-v1.0-hybrid I 0.750
Gorai.006G008700 Gossypium raimondii Gorai.006G008700 I 0.750
Lus10022943.g Linum usitatissimum Lus10022943.g I 0.750
Lus10027600.g Linum usitatissimum Lus10027600.g I 0.750
MDP0000153538 Malus domestica MDP0000153538 I 0.750
MDP0000185253 Malus domestica MDP0000185253 I 0.750
MDP0000319957 Malus domestica MDP0000319957 I 0.750
orange1.1g001969m.g Citrus sinensis orange1.1g001969m.g I 0.750
SapurV1A.0521s0030 Salix purpurea SapurV1A.0521s0030 I 0.750
PK27862.1 Cannabis sativa PK27862.1 I 0.750
ARF6 Arabidopsis thaliana AT1G30330 I 0.734
BGIOSGA007153 Oryza indica BGIOSGA007153 I 0.734
BGIOSGA026655 Oryza indica BGIOSGA026655 I 0.734
Bo3g148950 Brassica oleracea Bo3g148950 I 0.734
Bo5g062810 Brassica oleracea Bo5g062810 I 0.734
Bo6g099440 Brassica oleracea Bo6g099440 I 0.734
Bra004125 Brassica rapa Bra004125 I 0.734
Bra010776 Brassica rapa Bra010776 I 0.734
BRADI1G34340 Brachypodium distachyon BRADI1G34340 I 0.734
F775_07729 Aegilops tauschii F775_07729 I 0.734
F775_09095 Aegilops tauschii F775_09095 I 0.734
ARF6 Arabidopsis lyrata fgenesh2_kg.1__3210__AT1G30330.2 I 0.734
GRMZM2G102845 Zea mays GRMZM2G102845 I 0.734
GRMZM2G317900 Zea mays GRMZM2G317900 I 0.734
GSMUA_Achr3G10240_001 Musa acuminata GSMUA_Achr3G10240_001 I 0.734
GSMUA_Achr6G19850_001 Musa acuminata GSMUA_Achr6G19850_001 I 0.734
GSMUA_Achr8G23850_001 Musa acuminata GSMUA_Achr8G23850_001 I 0.734
LPERR02G03100 Leersia perrieri LPERR02G03100 I 0.734
MLOC_73144 Hordeum vulgare MLOC_73144 I 0.734
MTR_4g124900 Medicago truncatula MTR_4g124900 I 0.734
OB02G13010 Oryza brachyantha OB02G13010 I 0.734
OB06G15720 Oryza brachyantha OB06G15720 I 0.734
OBART02G03410 Oryza barthii OBART02G03410 I 0.734
OBART08G20780 Oryza barthii OBART08G20780 I 0.734
OGLUM02G03280 Oryza glumaepatula OGLUM02G03280 I 0.734
OGLUM08G22050 Oryza glumaepatula OGLUM08G22050 I 0.734
OLONG_021742 Oryza longistaminata OLONG_021742 I 0.734
OMERI02G01870 Oryza meridionalis OMERI02G01870 I 0.734
OMERI02G04100 Oryza meridionalis OMERI02G04100 I 0.734
ONIVA02G03290 Oryza nivara ONIVA02G03290 I 0.734
ONIVA08G23730 Oryza nivara ONIVA08G23730 I 0.734
OPUNC02G02660 Oryza punctata OPUNC02G02660 I 0.734
OPUNC08G18850 Oryza punctata OPUNC08G18850 I 0.734
ORGLA02G0031900 Oryza glaberrima ORGLA02G0031900 I 0.734
ORGLA08G0183900 Oryza glaberrima ORGLA08G0183900 I 0.734
ORUFI02G03320 Oryza rufipogon ORUFI02G03320 I 0.734
ORUFI08G23260 Oryza rufipogon ORUFI08G23260 I 0.734
OS02G0141100 Oryza sativa OS02G0141100 I 0.734
OS08G0520550 Oryza sativa OS08G0520550 I 0.734
POPTR_0001s36900 Populus trichocarpa POPTR_0001s36900 I 0.734
POPTR_0018s07420 Populus trichocarpa POPTR_0018s07420 I 0.734
PRUPE_ppa000708mg Prunus persica PRUPE_ppa000708mg I 0.734
Sb07g027080 Sorghum bicolor Sb07g027080 I 0.734
Sb10g029130 Sorghum bicolor Sb10g029130 I 0.734
Si013155m.g Setaria italica Si013155m.g I 0.734
Traes_6AS_967D58FB4 Triticum aestivum Traes_6AS_967D58FB4 I 0.734
Traes_6BS_444DFA94E Triticum aestivum Traes_6BS_444DFA94E I 0.734
Traes_6DS_8BE5BE6AC Triticum aestivum Traes_6DS_8BE5BE6AC I 0.734
Traes_7AL_F36D340F4 Triticum aestivum Traes_7AL_F36D340F4 I 0.734
Traes_7DL_343A252DC Triticum aestivum Traes_7DL_343A252DC I 0.734
TRIUR3_19224 Triticum urartu TRIUR3_19224 I 0.734
TRIUR3_25750 Triticum urartu TRIUR3_25750 I 0.734
VIT_11s0016g00640 Vitis vinifera VIT_11s0016g00640 I 0.734
Pm027119 Prunus mume Pm027119 I 0.734
mgf007171m Mimulus guttatus mgf007171m I 0.734
Bostr.15697s0332 Boechera stricta Bostr.15697s0332 I 0.734
Cagra.1508s0171 Capsella grandiflora Cagra.1508s0171 I 0.734
Carubv10008239m.g Capsella rubella Carubv10008239m.g I 0.734
Ciclev10014200m.g Citrus clementina Ciclev10014200m.g I 0.734
evm.TU.supercontig_115.30 Carica papaya evm.TU.supercontig_115.30 I 0.734
Gorai.001G017000 Gossypium raimondii Gorai.001G017000 I 0.734
Gorai.009G037100 Gossypium raimondii Gorai.009G037100 I 0.734
Gorai.010G091300 Gossypium raimondii Gorai.010G091300 I 0.734
Lus10033635.g Linum usitatissimum Lus10033635.g I 0.734
MDP0000876321 Malus domestica MDP0000876321 I 0.734
orange1.1g002390m.g Citrus sinensis orange1.1g002390m.g I 0.734
Pavir.Fa00483 Panicum virgatum Pavir.Fa00483 I 0.734
Pavir.Fb01896 Panicum virgatum Pavir.Fb01896 I 0.734
SapurV1A.0870s0230 Salix purpurea SapurV1A.0870s0230 I 0.734
SapurV1A.2095s0020 Salix purpurea SapurV1A.2095s0020 I 0.734
Thhalv10006747m.g Eutrema salsugineum Thhalv10006747m.g I 0.734
chr6.CM0420.10.nd Lotus japonicus chr6.CM0420.10.nd N 0.734
Pavir.Gb00274 Panicum virgatum Pavir.Gb00274 I 0.725
ARF19 Arabidopsis thaliana AT1G19220 I 0.719
Bo5g027250 Brassica oleracea Bo5g027250 I 0.719
Bra025720 Brassica rapa Bra025720 I 0.719
ARF19 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001739 N 0.719
GRMZM2G073750 Zea mays GRMZM2G073750 I 0.719
GSMUA_Achr5G05010_001 Musa acuminata GSMUA_Achr5G05010_001 I 0.719
LPERR08G17530 Leersia perrieri LPERR08G17530 I 0.719
MTR_2g043250 Medicago truncatula MTR_2g043250 I 0.719
Solyc05g047460.2 Solanum lycopersicum Solyc05g047460.2 I 0.719
Bostr.7128s0527 Boechera stricta Bostr.7128s0527 I 0.719
Cagra.1961s0078 Capsella grandiflora Cagra.1961s0078 I 0.719
Carubv10008159m.g Capsella rubella Carubv10008159m.g I 0.719
SapurV1A.0076s0280 Salix purpurea SapurV1A.0076s0280 I 0.719
Thhalv10006635m.g Eutrema salsugineum Thhalv10006635m.g I 0.719
PDK_20s1375001g001 Phoenix dactylifera PDK_20s1375001g001 I 0.719
Ca_05876 Cicer arietinum Ca_05876 N 0.708
BGIOSGA014158 Oryza indica BGIOSGA014158 I 0.703
F775_17365 Aegilops tauschii F775_17365 I 0.703
GLYMA08G03141 Glycine max GLYMA08G03141 I 0.703
GRMZM2G034840 Zea mays GRMZM2G034840 I 0.703
GRMZM2G086949 Zea mays GRMZM2G086949 I 0.703
GSMUA_Achr1G20040_001 Musa acuminata GSMUA_Achr1G20040_001 I 0.703
MLOC_55345 Hordeum vulgare MLOC_55345 I 0.703
PGSC0003DMG400003771 Solanum tuberosum PGSC0003DMG400003771 I 0.703
PRUPE_ppa000946mg Prunus persica PRUPE_ppa000946mg I 0.703
Sb06g031900 Sorghum bicolor Sb06g031900 I 0.703
SELMODRAFT_451395 Selaginella moellendorffii SELMODRAFT_451395 I 0.703
SELMODRAFT_451397 Selaginella moellendorffii SELMODRAFT_451397 I 0.703
Si021121m.g Setaria italica Si021121m.g I 0.703
Solyc04g081240.2 Solanum lycopersicum Solyc04g081240.2 I 0.703
Traes_2AL_05ECC440C Triticum aestivum Traes_2AL_05ECC440C I 0.703
Traes_2BL_E322FD546 Triticum aestivum Traes_2BL_E322FD546 I 0.703
Traes_2DL_FBE64209C Triticum aestivum Traes_2DL_FBE64209C I 0.703
MP Vitis vinifera VIT_18s0001g13930 I 0.703
Pm006237 Prunus mume Pm006237 I 0.703
Cucsa.342870 Cucumis sativus Cucsa.342870 I 0.703
mgf023734m Mimulus guttatus mgf023734m I 0.703
Carubv10000065m.g Capsella rubella Carubv10000065m.g I 0.703
Eucgr.F02090 Eucalyptus grandis Eucgr.F02090 I 0.703
Gorai.002G124400 Gossypium raimondii Gorai.002G124400 I 0.703
Lus10024320.g Linum usitatissimum Lus10024320.g I 0.703
MDP0000143749 Malus domestica MDP0000143749 I 0.703
MDP0000211459 Malus domestica MDP0000211459 I 0.703
Pavir.Ga00157 Panicum virgatum Pavir.Ga00157 I 0.703
PDK_20s1354161g001 Phoenix dactylifera PDK_20s1354161g001 I 0.703