CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_00s1203g00010
(
Vitis vinifera
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
VIT_00s1203g00010
T021875_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN
NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.879
0.879
ARF5
M06701_2.00
Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW
Dap-seq
OMalley et al.(2016)
MP_col
0.742
0.742
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN
NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.727
0.727
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_00s1203g00010.t01
B3
31
101
FCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTEKE
Links
Other
B3
family TFs
Other
Vitis vinifera
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_03s0167g00010
Vitis vinifera
VIT_03s0167g00010
I
0.984
LjSGA_022975.2
Lotus japonicus
LjSGA_022975.2
I
0.962
cassava32201.m1
Manihot esculenta
cassava32201.m1
I
0.939
TCM_029410
Theobroma cacao
TCM_029410
I
0.939
cassava29104.valid.m1
Manihot esculenta
cassava29104.valid.m1
I
0.939
Pm010467
Prunus mume
Pm010467
I
0.939
cassava2408.valid.m1
Manihot esculenta
cassava2408.valid.m1
I
0.939
gene30394-v1.0-hybrid
Fragaria vesca
gene30394-v1.0-hybrid
I
0.939
cassava29103.valid.m1
Manihot esculenta
cassava29103.valid.m1
I
0.939
ARF6
Vitis vinifera
VIT_10s0003g04100
I
0.939
SapurV1A.0030s0180
Salix purpurea
SapurV1A.0030s0180
I
0.939
PK26077.1
Cannabis sativa
PK26077.1
I
0.939
PRUPE_ppa001179mg
Prunus persica
PRUPE_ppa001179mg
I
0.939
MDP0000268306
Malus domestica
MDP0000268306
I
0.939
Gorai.009G152700
Gossypium raimondii
Gorai.009G152700
I
0.939
29599.m000177
Ricinus communis
29599.m000177
I
0.939
SapurV1A.4298s0010
Salix purpurea
SapurV1A.4298s0010
I
0.927
Cla019844
Citrullus lanatus
Cla019844
I
0.924
Cucsa.152170
Cucumis sativus
Cucsa.152170
I
0.924
Sb08g021460
Sorghum bicolor
Sb08g021460
I
0.909
GRMZM2G081158
Zea mays
GRMZM2G081158
I
0.909
GSMUA_Achr11G25770_001
Musa acuminata
GSMUA_Achr11G25770_001
I
0.909
LjSGA_026543.1
Lotus japonicus
LjSGA_026543.1
I
0.881
OMERI04G24630
Oryza meridionalis
OMERI04G24630
I
0.873
Cucsa.173470
Cucumis sativus
Cucsa.173470
I
0.864
AMTR_s00007p00267580
Amborella trichopoda
AMTR_s00007p00267580
I
0.864
ORUFI06G26570
Oryza rufipogon
ORUFI06G26570
I
0.860
Cla009258
Citrullus lanatus
Cla009258
I
0.850
29739.m003713
Ricinus communis
29739.m003713
I
0.848
POPTR_0006s14070
Populus trichocarpa
POPTR_0006s14070
I
0.848
evm.TU.supercontig_108.15
Carica papaya
evm.TU.supercontig_108.15
I
0.841
MLOC_14584
Hordeum vulgare
MLOC_14584
I
0.833
VIT_11s0016g00640
Vitis vinifera
VIT_11s0016g00640
I
0.833
Ciclev10014200m.g
Citrus clementina
Ciclev10014200m.g
I
0.833
MTR_4g124900
Medicago truncatula
MTR_4g124900
I
0.833
GRMZM2G102845
Zea mays
GRMZM2G102845
I
0.833
BRADI1G46602
Brachypodium distachyon
BRADI1G46602
I
0.833
Bra004125
Brassica rapa
Bra004125
I
0.833
Bo6g099440
Brassica oleracea
Bo6g099440
I
0.833
Traes_7AS_582E3076D
Triticum aestivum
Traes_7AS_582E3076D
I
0.833
Traes_7BS_F44A273F8
Triticum aestivum
Traes_7BS_F44A273F8
I
0.833
Traes_7DS_1948388F8
Triticum aestivum
Traes_7DS_1948388F8
I
0.833
orange1.1g002390m.g
Citrus sinensis
orange1.1g002390m.g
I
0.833
Solyc12g006350.1
Solanum lycopersicum
Solyc12g006350.1
I
0.830
VIT_04s0079g00160
Vitis vinifera
VIT_04s0079g00160
I
0.828
GSMUA_Achr6G19850_001
Musa acuminata
GSMUA_Achr6G19850_001
I
0.818
OB06G15720
Oryza brachyantha
OB06G15720
I
0.818
Pm027119
Prunus mume
Pm027119
I
0.818
PRUPE_ppa000708mg
Prunus persica
PRUPE_ppa000708mg
I
0.818
Traes_2BL_889C1F272
Triticum aestivum
Traes_2BL_889C1F272
I
0.806
PGSC0003DMG401018664
Solanum tuberosum
PGSC0003DMG401018664
I
0.803
PGSC0003DMG400003771
Solanum tuberosum
PGSC0003DMG400003771
I
0.803
Lus10024320.g
Linum usitatissimum
Lus10024320.g
I
0.803
MDP0000143749
Malus domestica
MDP0000143749
I
0.803
Carubv10000065m.g
Capsella rubella
Carubv10000065m.g
I
0.803
MTR_2g043250
Medicago truncatula
MTR_2g043250
I
0.803
Solyc04g081240.2
Solanum lycopersicum
Solyc04g081240.2
I
0.803
Pavir.Gb00274
Panicum virgatum
Pavir.Gb00274
I
0.797
evm.TU.supercontig_26.25
Carica papaya
evm.TU.supercontig_26.25
I
0.788
Cucsa.117420
Cucumis sativus
Cucsa.117420
I
0.788
Solyc12g006340.1
Solanum lycopersicum
Solyc12g006340.1
I
0.786
PRUPE_ppa024354mg
Prunus persica
PRUPE_ppa024354mg
I
0.770
PDK_20s1359912g002
Phoenix dactylifera
PDK_20s1359912g002
I
0.766
OB01G35190
Oryza brachyantha
OB01G35190
I
0.742
Traes_2AL_98457FFEE
Triticum aestivum
Traes_2AL_98457FFEE
I
0.738
PDK_20s1375001g001
Phoenix dactylifera
PDK_20s1375001g001
I
0.727
TRIUR3_22410
Triticum urartu
TRIUR3_22410
I
0.725
F775_00614
Aegilops tauschii
F775_00614
I
0.714
OB05G33320
Oryza brachyantha
OB05G33320
I
0.712
Bra021885
Brassica rapa
Bra021885
I
0.712
Ca_05876
Cicer arietinum
Ca_05876
N
0.708
TRIUR3_26420
Triticum urartu
TRIUR3_26420
I
0.701