CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
orange1.1g042542m.g
(
Citrus sinensis
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
orange1.1g042542m.g
T023764_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g042542m
B3
22
114
FFQVILAVTIEDKKMKIPQNFVGRFGDELSYVATLTNPKGYVVRIGITKKEGKIWFDDGWNEFVQYHSIGVGYFVVFQYRKNSKFQVFVFNTT
orange1.1g042542m
B3
268
359
FLVFLRASNMQLNCVYVPNSFARKYFNGEECVTIQDSDGRKLAVKVKVSCSKCLLTRWGKFFKKTNVKEGDILFFEMIQMKNILLKVSVFNA
Links
Other
B3
family TFs
Other
Citrus sinensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCDUO_05218
Ancylostoma duodenale
ANCDUO_05218
N
CBN23036
Caenorhabditis brenneri
CBN23036
N
CBG15675
Caenorhabditis briggsae
CBG15675
N
nhr-121
Caenorhabditis elegans
WBGene00003711
N
CRE22944
Caenorhabditis remanei
CRE22944
N
HPLM_0000487701
Haemonchus placei
HPLM_0000487701
N
scaffold1360-EXSNAP2012.4
Pristionchus exspectatus
scaffold1360-EXSNAP2012.4
N
L596_g4886
Steinernema carpocapsae
L596_g4886
N
L889_g18610
Steinernema feltiae
L889_g18610
N
L898_g5432
Steinernema monticolum
L898_g5432
N
L892_g21335
Steinernema scapterisci
L892_g21335
N
SPAL_0001407800
Strongyloides papillosus
SPAL_0001407800
N
SSTP_0000766300
Strongyloides stercoralis
SSTP_0000766300
N
SVE_1723200
Strongyloides venezuelensis
SVE_1723200
N