CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g21335
(
Steinernema scapterisci
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L892_g21335
T309239_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g21335.t1
Nuclear receptor
66
135
RKCAICGAPSNGYHFNAPSCSACAAFFRRTVTLSKNFVCAQNRNCRVYYAMRVICRACRYAKCIASGMDR
L892_g21335.t2
Nuclear receptor
66
135
RKCAICGAPSNGYHFNAPSCSACAAFFRRTVTLSKNFVCAQNRNCRVYYAMRVICRACRYAKCIASGMDR
Links
Other
Nuclear receptor
family TFs
Other
Steinernema scapterisci
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g4886
Steinernema carpocapsae
L596_g4886
N
0.988
HPLM_0000487701
Haemonchus placei
HPLM_0000487701
N
0.969
CBN23036
Caenorhabditis brenneri
CBN23036
N
0.968
CBG15675
Caenorhabditis briggsae
CBG15675
N
0.967
nhr-121
Caenorhabditis elegans
WBGene00003711
N
0.965
L898_g5432
Steinernema monticolum
L898_g5432
N
0.965
scaffold1360-EXSNAP2012.4
Pristionchus exspectatus
scaffold1360-EXSNAP2012.4
N
0.964
scaffold902-EXSNAP2012.8
Pristionchus exspectatus
scaffold902-EXSNAP2012.8
N
0.964
L889_g18610
Steinernema feltiae
L889_g18610
N
0.963
SSTP_0000766300
Strongyloides stercoralis
SSTP_0000766300
N
0.918
SPAL_0001407800
Strongyloides papillosus
SPAL_0001407800
N
0.905
SVE_1723200
Strongyloides venezuelensis
SVE_1723200
N
0.905
ANCDUO_05218
Ancylostoma duodenale
ANCDUO_05218
N
0.774